RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 NUP205Q92621 2012 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 ZNF638Q14966 1978 aaKnown RBP4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 TRPC5OSA6NMA1 111 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 STAMBPO95630 424 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 DNAJB1P25685 340 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 CLCN5P51795 746 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 MGAT3Q09327 533 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 EFEMP1Q12805 493 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 CRHR2Q13324 411 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 ART3Q13508 389 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 CSHL1Q14406 222 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 ZNF235Q14590 738 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 LPIN1Q14693 890 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 CNGA3Q16281 694 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 MARC1Q5VT66 337 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 AGAP9Q5VTM2 703 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 NEPROQ6NW34 567 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 ESRP1Q6NXG1 681 aaKnown RBP4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 TMEM154Q6P9G4 183 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 BHLHA9Q7RTU4 235 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 PIWIL4Q7Z3Z4 852 aaKnown RBP4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 CLEC14AQ86T13 490 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 SNX32Q86XE0 403 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 DENND6AQ8IWF6 608 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 ARHGAP12Q8IWW6 846 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 FBXO32Q969P5 355 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 SGF29Q96ES7 293 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 IFT43Q96FT9 208 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 PANX3Q96QZ0 392 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 GORASP1Q9BQQ3 440 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 NUF2Q9BZD4 464 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 DRC3Q9H069 523 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 POMKQ9H5K3 350 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 MRM3Q9HC36 420 aaKnown RBP4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 MRGBPQ9NV56 204 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 FNIP2Q9P278 1114 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 CDH22Q9UJ99 828 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 PCDHB5Q9Y5E4 795 aa4.9□□□□□ -1.62
PPP1R9A-201ENST00000289495 G3V2L1 256 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 MGEA5O60502 916 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 TADA2AO75478 443 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 ZMPSTE24O75844 475 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 GSRP00390 522 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 AMHP03971 560 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 CHRNGP07510 517 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 PIK3R1P27986 724 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 PPARGP37231 505 aaPredicted RBP4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 SLC1A2P43004 574 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 SERPINH1P50454 418 aaKnown RBP4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 POU4F1Q01851 419 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 GEN1Q17RS7 908 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 GRAMD1BQ3KR37 738 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 SLC9B1Q4ZJI4 515 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 ZNF280DQ6N043 979 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 EPGNQ6UW88 154 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 BNC2Q6ZN30 1099 aaPredicted RBP4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 KIAA0408Q6ZU52 694 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 MON1AQ86VX9 555 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 RNF135Q8IUD6 432 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 APLFQ8IW19 511 aaPredicted RBP4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 NUP93Q8N1F7 819 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 FSTL5Q8N475 847 aaPredicted RBP4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 TRIB2Q92519 343 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 FAR2Q96K12 515 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 CATSPER2Q96P56 530 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 RTKNQ9BST9 563 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 OXCT2Q9BYC2 517 aaPredicted RBP4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 UNKQ9C0B0 810 aaKnown RBP4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 ZYG11BQ9C0D3 744 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 SLC25A51Q9H1U9 297 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 EML4Q9HC35 981 aaKnown RBP4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 OLA1Q9NTK5 396 aaKnown RBP4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 DNAJB4Q9UDY4 337 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 PLA2G4CQ9UP65 541 aa4.9□□□□□ -1.63
PPP1R9A-201ENST00000289495 TXNDC9O14530 226 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 CFLARO15519 480 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 MAFKO60675 156 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 GPC4O75487 556 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 SNUPNO95149 360 aaKnown RBP4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 HMBSP08397 361 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 ENO3P13929 434 aaPredicted RBP4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 RHOQP17081 205 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 ATP5F1P24539 256 aaPredicted RBP4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 EPHA3P29320 983 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 HOXC13P31276 330 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 FLT3LGP49771 235 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 TUBB3Q13509 450 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 CYLC2Q14093 348 aaPredicted RBP4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 ZNF460Q14592 562 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 MAPRE2Q15555 327 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 KCNA10Q16322 511 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 MMEL1Q495T6 779 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 HSF5Q4G112 596 aaPredicted RBP4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 CTXN3Q4LDR2 81 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 ARL13AQ5H913 290 aaPredicted RBP4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 NOMO2Q5JPE7 1267 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 TCHHL1Q5QJ38 904 aaPredicted RBP4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 C10orf120Q5SQS8 335 aa4.89□□□□□ -1.63
PPP1R9A-201ENST00000289495 SDHAF4Q5VUM1 108 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms