RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 ZNF143P52747 638 aaPredicted RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 MAMLD1Q13495 774 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 DENND5AQ6IQ26 1287 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 DNAJC14Q6Y2X3 702 aaPredicted RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 SV2AQ7L0J3 742 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 UNC93AQ86WB7 457 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 KAT2BQ92831 832 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ITCHQ96J02 903 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 GPRC5CQ9NQ84 441 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 SPG21Q9NZD8 308 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 MAGEL2Q9UJ55 1249 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 GRIN3BO60391 1043 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 SDC2P34741 201 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 GRIK4Q16099 956 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 GPRIN3Q6ZVF9 776 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 PIK3C3Q8NEB9 887 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ZNF606Q8WXB4 792 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 SKA1Q96BD8 255 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 UROC1Q96N76 676 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 GMIPQ9P107 970 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ZNF214Q9UL59 606 aaPredicted RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 SLC9A3R1O14745 358 aaPredicted RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 OTCP00480 354 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 CATP04040 527 aaKnown RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 FAM153BP0C7A2 387 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ANPEPP15144 967 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ITGA3P26006 1051 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 FMO4P31512 558 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 GMPSP49915 693 aaPredicted RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 PEX6Q13608 980 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 FAM153CQ494X1 144 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 KCNT2Q6UVM3 1135 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 TRMT11Q7Z4G4 463 aaKnown RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 MCM8Q9UJA3 840 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 HBS1LQ9Y450 684 aaKnown RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 SCN8AQ9UQD0 1980 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 DHRS12A0PJE2 317 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 AP3D1O14617 1153 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 IFNGP01579 166 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 CHRNGP07510 517 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ENO2P09104 434 aaPredicted RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 FGFR3P22607 806 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 CLCN3P51790 818 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 RPS6KA3P51812 740 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 BIKQ13323 160 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 PGM5Q15124 567 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 RFTN2Q52LD8 501 aaPredicted RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 SLC27A1Q6PCB7 646 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 LINC00116Q8NCU8 138 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 CAPSLQ8WWF8 208 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 TDRD1Q9BXT4 1180 aaKnown RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 GPN1Q9HCN4 374 aaPredicted RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 RAB26Q9ULW5 256 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 GAKO14976 1311 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 LTN1O94822 1766 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 CCNDBP1O95273 360 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 KDELR1P24390 212 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 GRIA3P42263 894 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ZNF157P51786 506 aaPredicted RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ARFIP1P53367 373 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 TYSND1Q2T9J0 566 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 CLCC1Q96S66 551 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ZNF670Q9BS34 389 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 CCDC167Q9P0B6 97 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 LYVE1Q9Y5Y7 322 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 UMPSP11172 480 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 NDST1P52848 882 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 TTC7BQ86TV6 843 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 SCAIQ8N9R8 606 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 SLC9A7Q96T83 725 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 BCL2L14Q9BZR8 327 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 ZMYM5Q9UJ78 669 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 SSR3Q9UNL2 185 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 PCDHGA3Q9Y5H0 932 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 SNCAIPQ9Y6H5 919 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 PCDH8O95206 1070 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 GNRH1P01148 92 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 ZNF286BP0CG31 522 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 POLR2EP19388 210 aaKnown RBP8.04□□□□□ -1.12
LIMD1-201ENST00000273317 UGT1A5P35504 534 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 GABRB2P47870 512 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 TTMPQ5BVD1 217 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 TRIM40Q6P9F5 258 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 RPTNQ6XPR3 784 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 CELF6Q96J87 481 aaKnown RBP8.04□□□□□ -1.12
LIMD1-201ENST00000273317 APBA2Q99767 749 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 CHCHD6Q9BRQ6 235 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 PNPLA8Q9NP80 782 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 TRIP11Q15643 1979 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 PRKCIP41743 596 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 CRATP43155 626 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 FBXO16Q8IX29 292 aaPredicted RBP8.04□□□□□ -1.12
LIMD1-201ENST00000273317 PIH1D2Q8WWB5 315 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 FAM136AQ96C01 138 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 TEFMQ96QE5 360 aaKnown RBP8.04□□□□□ -1.12
LIMD1-201ENST00000273317 ACSS3Q9H6R3 686 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 DNAJC18Q9H819 358 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 ZNF222Q9UK12 451 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 CHST10O43529 356 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 CYP7B1O75881 506 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms