RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 HNRNPA1P09651 372 aaKnown RBP eCLIP11.69□□□□□ -0.54
SCAF11-201ENST00000266589 ATXN1LP0C7T5 689 aaKnown RBP11.69□□□□□ -0.54
SCAF11-201ENST00000266589 DDX6P26196 483 aaKnown RBP eCLIP11.69□□□□□ -0.54
SCAF11-201ENST00000266589 CCNFP41002 786 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 RGRP47804 291 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 GPM6BQ13491 265 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 CYTH1Q15438 398 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 SHHQ15465 462 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 ARHGAP15Q53QZ3 475 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 GRTP1Q5TC63 336 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 ZNF697Q5TEC3 545 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 HHATQ5VTY9 493 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 ESRP1Q6NXG1 681 aaKnown RBP11.69□□□□□ -0.54
SCAF11-201ENST00000266589 LINGO4Q6UY18 593 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 TPGS1Q6ZTW0 290 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 STRA8Q7Z7C7 330 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 CMTM8Q8IZV2 173 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 SH3RF2Q8TEC5 729 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 IFT43Q96FT9 208 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 RBBP8Q99708 897 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 FEM1AQ9BSK4 669 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 PRKD2Q9BZL6 878 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 TASP1Q9H6P5 420 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 PCMTD2Q9NV79 361 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 SLC17A7Q9P2U7 560 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 SLC2A6Q9UGQ3 507 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 GRID1Q9ULK0 1009 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 ATG2AQ2TAZ0 1938 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 NOTCH4Q99466 2003 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 CHD7Q9P2D1 2997 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 HEATR9A2RTY3 570 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 F7P08709 466 aaPredicted RBP11.69□□□□□ -0.54
SCAF11-201ENST00000266589 SCNN1BP51168 640 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 NTHL1P78549 312 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 CDK18Q07002 472 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 MPPE1Q53F39 396 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 PDE12Q6L8Q7 609 aaKnown RBP11.69□□□□□ -0.54
SCAF11-201ENST00000266589 TIFABQ6ZNK6 161 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 RBM23Q86U06 439 aaKnown RBP11.69□□□□□ -0.54
SCAF11-201ENST00000266589 RNF135Q8IUD6 432 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 ATXN7L3BQ96GX2 97 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 FEM1CQ96JP0 617 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 SAMD11Q96NU1 681 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 RANBP9Q96S59 729 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 SRPK1Q96SB4 655 aaKnown RBP11.69□□□□□ -0.54
SCAF11-201ENST00000266589 IQCGQ9H095 443 aaKnown RBP11.69□□□□□ -0.54
SCAF11-201ENST00000266589 NOD2Q9HC29 1040 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 TREX1Q9NSU2 369 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 PLK2Q9NYY3 685 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 OR51B4Q9Y5P0 310 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 HCFC2Q9Y5Z7 792 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 CHD9Q3L8U1 2897 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 ZMPSTE24O75844 475 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 TMCC1O94876 653 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 VAPBO95292 243 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 CD160O95971 181 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 ALDOAP04075 364 aaKnown RBP11.68□□□□□ -0.54
SCAF11-201ENST00000266589 PAMP19021 973 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 CR2P20023 1033 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 HLA-DPA1P20036 260 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 FOXN2P32314 431 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 MAGEA10P43363 369 aaPredicted RBP11.68□□□□□ -0.54
SCAF11-201ENST00000266589 ERVK-21P61565 698 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 PDE1BQ01064 536 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 DNAJC3Q13217 504 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 MSLNQ13421 630 aaPredicted RBP11.68□□□□□ -0.54
SCAF11-201ENST00000266589 GALNT3Q14435 633 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 CNGA3Q16281 694 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 CDHR3Q6ZTQ4 885 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 GRASPQ7Z6J2 395 aaPredicted RBP11.68□□□□□ -0.54
SCAF11-201ENST00000266589 LEMD2Q8NC56 503 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 RIN3Q8TB24 985 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 ALG14Q96F25 216 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 FAM111AQ96PZ2 611 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 SLC13A1Q9BZW2 595 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 NSRP1Q9H0G5 558 aaKnown RBP11.68□□□□□ -0.54
SCAF11-201ENST00000266589 CERS4Q9HA82 394 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 SCUBE2Q9NQ36 999 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 MKS1Q9NXB0 559 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 VPS51Q9UID3 782 aa11.68□□□□□ -0.54
SCAF11-201ENST00000266589 YBX2Q9Y2T7 364 aaKnown RBP11.68□□□□□ -0.54
SCAF11-201ENST00000266589 E2F8A0AVK6 867 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 TPP1O14773 563 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 INSIG1O15503 277 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 FGF1P05230 155 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 TAC1P20366 129 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 ARNTP27540 789 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 SPRP35270 261 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-201ENST00000266589 LIMK2P53671 638 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 ZKSCAN8Q15776 578 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-201ENST00000266589 SLC14A2Q15849 920 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 PDK4Q16654 411 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 PRSS36Q5K4E3 855 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 MPP7Q5T2T1 576 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 ARMC3Q5W041 872 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 KIAA0930Q6ICG6 404 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-201ENST00000266589 ADGRD2Q7Z7M1 963 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 CNPY4Q8N129 248 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 NDUFAF2Q8N183 169 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 DCAF4L2Q8NA75 395 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms