RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 HSPA1AP0DMV8 641 aaKnown RBP16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 HSPA1BP0DMV9 641 aaKnown RBP16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 RHDQ02161 417 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 APOFQ13790 326 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 ELMSAN1Q6PJG2 1045 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 LDB1Q86U70 411 aaPredicted RBP16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 RALGPS2Q86X27 583 aaPredicted RBP16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 POC5Q8NA72 575 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 FCRL3Q96P31 734 aaPredicted RBP16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 BBS2Q9BXC9 721 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 TRIM15Q9C019 465 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 DTLQ9NZJ0 730 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 TRPC5OSA6NMA1 111 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 EDN1P05305 212 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 CHRNA5P30532 468 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 STAT5BP51692 787 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 PRKAA2P54646 552 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 IGFN1Q86VF2 1251 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 PLD3Q8IV08 490 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 SCAIQ8N9R8 606 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 HDAC10Q969S8 669 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 NT5C1AQ9BXI3 368 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 BAG5Q9UL15 447 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 L1CAMP32004 1257 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 DPYSQ14117 519 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 BTG3Q14201 252 aaPredicted RBP16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 ZNF470Q6ECI4 717 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 TMEM102Q8N9M5 508 aaPredicted RBP16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 RSPH1Q8WYR4 309 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 PPP1R14BQ96C90 147 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 ASB9Q96DX5 294 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 HBEGFQ99075 208 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 FTHL17Q9BXU8 183 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 ST6GALNAC4Q9H4F1 302 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 ZBTB26Q9HCK0 441 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 MRGBPQ9NV56 204 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 A8MV72 311 aaPredicted RBP16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 H3BMM5 538 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 TNPO2O14787 897 aaKnown RBP16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 AURKAO14965 403 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 OPRL1P41146 370 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 INAQ16352 499 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 OR2T34Q8NGX1 318 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 OR2T3Q8NH03 318 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 VPS33AQ96AX1 596 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 SMARCAD1Q9H4L7 1026 aa16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 EVLQ9UI08 416 aaPredicted RBP16.07■□□□□ 0.16
PRPF40B-201ENST00000261897 C9IYK1 514 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 PMM2O15305 246 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 NOBOXO60393 691 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 LDLRP01130 860 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 CYP4B1P13584 511 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 NAMPTP43490 491 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 HARS2P49590 506 aaKnown RBP16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 GJA9P57773 515 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 C15orf39Q6ZRI6 1047 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 TBC1D15Q8TC07 691 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 LRCH3Q96II8 777 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 HMG20AQ9NP66 347 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 MAGED1Q9Y5V3 778 aaPredicted RBP16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 PRSS51A0A1B0GVH4 220 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 YDJCA8MPS7 323 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 M0QYT0 321 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 TIMM44O43615 452 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 SYNCRIPO60506 623 aaKnown RBP16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 TXNP10599 105 aaKnown RBP16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 GFAPP14136 432 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 NMBRP28336 390 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 FBXO30Q8TB52 745 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 SGCDQ92629 289 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 CSPG4P5Q96PW8 444 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 RBBP8Q99708 897 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 C9orf16Q9BUW7 83 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 UNC93B1Q9H1C4 597 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 NUDT5Q9UKK9 219 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 TKTP29401 623 aaKnown RBP16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 PTPN7P35236 360 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 CLK1P49759 484 aaKnown RBP16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 COPZ1P61923 177 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 NFATC3Q12968 1075 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 SF3B4Q15427 424 aaKnown RBP eCLIP16.06■□□□□ 0.161e-8■■■■■ 43.8
PRPF40B-201ENST00000261897 PPP1R26Q5T8A7 1209 aaPredicted RBP16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 TMEM236Q5W0B7 351 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 DSG4Q86SJ6 1040 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 TTC30AQ86WT1 665 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 DMRTB1Q96MA1 342 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 FSD1LQ9BXM9 530 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 CDHR5Q9HBB8 845 aa16.06■□□□□ 0.16
PRPF40B-201ENST00000261897 C2CD4BA6NLJ0 364 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 EEF2KO00418 725 aaKnown RBP16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 ALOX12P18054 663 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 IL5RAQ01344 420 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 PAGE2Q7Z2X7 111 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 APBB2Q92870 758 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 PLAC1Q9HBJ0 212 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 LRRC4Q9HBW1 653 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 MOSPD1Q9UJG1 213 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 CNTNAP4Q9C0A0 1308 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 A0A087WZ62 844 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 TCAF2A6NFQ2 919 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms