RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 ATP13A2Q9NQ11 1180 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 ADA2Q9NZK5 511 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 NPAP1Q9NZP6 1156 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 SAE1Q9UBE0 346 aaPredicted RBP12.79□□□□□ -0.36
FOXN3-201ENST00000261302 DCDC2Q9UHG0 476 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 ZNF221Q9UK13 617 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 PCDHGA7Q9Y5G6 932 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 COL2A1P02458 1487 aaPredicted RBP12.79□□□□□ -0.36
FOXN3-201ENST00000261302 TCAF2A6NFQ2 919 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 SHOXO15266 292 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 CLIC3O95833 236 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 CALCAP01258 141 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 CES1P23141 567 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 PPP5CP53041 499 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 PSME3P61289 254 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 TAGLNQ01995 201 aaKnown RBP12.79□□□□□ -0.36
FOXN3-201ENST00000261302 RALGDSQ12967 914 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 SLC13A2Q13183 592 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 MAPK11Q15759 364 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 ATP6AP1Q15904 470 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 HIST2H2ACQ16777 129 aaPredicted RBP12.79□□□□□ -0.36
FOXN3-201ENST00000261302 ODR4Q5SWX8 454 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 WDR78Q5VTH9 848 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 AFAP1L2Q8N4X5 818 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 CYGBQ8WWM9 190 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 SLC7A3Q8WY07 619 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 HTRA1Q92743 480 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 KLRG1Q96E93 195 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 C9orf16Q9BUW7 83 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 FUNDC2Q9BWH2 189 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 MKRN2Q9H000 416 aaKnown RBP12.79□□□□□ -0.36
FOXN3-201ENST00000261302 PCIF1Q9H4Z3 704 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 SYTL2Q9HCH5 934 aa12.79□□□□□ -0.36
FOXN3-201ENST00000261302 WDR6Q9NNW5 1121 aaKnown RBP12.79□□□□□ -0.36
FOXN3-201ENST00000261302 MN1Q10571 1320 aaPredicted RBP12.78□□□□□ -0.36
FOXN3-201ENST00000261302 THSD7BQ9C0I4 1608 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 C3orf70A6NLC5 250 aaPredicted RBP12.78□□□□□ -0.36
FOXN3-201ENST00000261302 ENPP3O14638 875 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 SYNCRIPO60506 623 aaKnown RBP12.78□□□□□ -0.36
FOXN3-201ENST00000261302 GSTM2P28161 218 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 YAP1P46937 504 aaKnown RBP12.78□□□□□ -0.36
FOXN3-201ENST00000261302 DEFB115Q30KQ5 88 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 BBS12Q6ZW61 710 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 SPRED1Q7Z699 444 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 PHF13Q86YI8 300 aaPredicted RBP12.78□□□□□ -0.36
FOXN3-201ENST00000261302 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.78□□□□□ -0.36
FOXN3-201ENST00000261302 OFCC1Q8IZS5 231 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 XXYLT1Q8NBI6 393 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 OR6F1Q8NGZ6 308 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 CRYGNQ8WXF5 182 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 FAM20AQ96MK3 541 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 EIF2AK1Q9BQI3 630 aaKnown RBP12.78□□□□□ -0.36
FOXN3-201ENST00000261302 ZNF717Q9BY31 904 aaPredicted RBP12.78□□□□□ -0.36
FOXN3-201ENST00000261302 UNC93B1Q9H1C4 597 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 RNPEPQ9H4A4 650 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 JMJD4Q9H9V9 463 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 TOPORSQ9NS56 1045 aaPredicted RBP12.78□□□□□ -0.36
FOXN3-201ENST00000261302 GIMAP4Q9NUV9 329 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 VAV3Q9UKW4 847 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 VWA7Q9Y334 891 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 hCG_2039718K7EN88 272 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 RASAL1O95294 804 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 AMHP03971 560 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 BMP1P13497 986 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 EIF2DP41214 584 aaKnown RBP12.78□□□□□ -0.36
FOXN3-201ENST00000261302 CTF1Q16619 201 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 TXNRD3NBQ6F5E7 133 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 TTBK2Q6IQ55 1244 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 ENOSF1Q7L5Y1 443 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 LYSMD2Q8IV50 215 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 CDAN1Q8IWY9 1227 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 DHRSXQ8N5I4 330 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 TDRD5Q8NAT2 981 aaKnown RBP12.78□□□□□ -0.36
FOXN3-201ENST00000261302 LILRB1Q8NHL6 650 aaPredicted RBP12.78□□□□□ -0.36
FOXN3-201ENST00000261302 BCL7BQ9BQE9 202 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 TMEM246Q9BRR3 403 aa12.78□□□□□ -0.36
FOXN3-201ENST00000261302 NAV1Q8NEY1 1877 aa12.77□□□□□ -0.36
FOXN3-201ENST00000261302 HEATR9A2RTY3 570 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 UPK1BO75841 260 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 MFN2O95140 757 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 HSPA4LO95757 839 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 PTTG1O95997 202 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 IMPDH1P20839 514 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 IL4RP24394 825 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 HUNKP57058 714 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 GCNT1Q02742 428 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 ZNF252P-AS1Q0IIN9 211 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 CYBRD1Q53TN4 286 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 PRR16Q569H4 304 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 PAGE2BQ5JRK9 111 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 CCNJQ5T5M9 372 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 FAM109AQ8N4B1 249 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 FAM71DQ8N9W8 422 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 JPH3Q8WXH2 748 aaPredicted RBP12.77□□□□□ -0.37
FOXN3-201ENST00000261302 LENG9Q96B70 501 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 DEPDC7Q96QD5 511 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 PSKH2Q96QS6 385 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 NPAS2Q99743 824 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 CHID1Q9BWS9 393 aa12.77□□□□□ -0.37
FOXN3-201ENST00000261302 GPRC5CQ9NQ84 441 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms