RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 CDK4P11802 303 aa19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 ITIH2P19823 946 aa19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 DAB2P98082 770 aa19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 SGCGQ13326 291 aa19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 ZNF211Q13398 564 aaPredicted RBP19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 ANO6Q4KMQ2 910 aa19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 OR4C6Q8NH72 309 aa19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 LRIG1Q96JA1 1093 aa19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 KLF6Q99612 283 aaPredicted RBP19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 CNPY3Q9BT09 278 aa19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 GPATCH2LQ9NWQ4 482 aa19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 ATMINO43313 823 aaPredicted RBP19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 TSPAN6O43657 245 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 NEBLO76041 1014 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 MBD3O95983 291 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 TNFAIP3P21580 790 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 ACP1P24666 158 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 ILKQ13418 452 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 FZD2Q14332 565 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 TPRG1LQ5T0D9 272 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 GDPD4Q6W3E5 623 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 KYAT3Q6YP21 454 aaKnown RBP19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 EXOC2Q96KP1 924 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 EPAS1Q99814 870 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 C1QTNF2Q9BXJ5 285 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 FPGTO14772 594 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 INSIG1O15503 277 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 RHOAP61586 193 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 INSM1Q01101 510 aaPredicted RBP19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 PDE1CQ14123 709 aaPredicted RBP19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 HS1BP3Q53T59 392 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 TTC7BQ86TV6 843 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 RAB7BQ96AH8 199 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 GDAP1L1Q96MZ0 367 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 SYT11Q9BT88 431 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 TTYH3Q9C0H2 523 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 RTN4Q9NQC3 1192 aaKnown RBP19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 GPR27Q9NS67 375 aa19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 IPO11Q9UI26 975 aaKnown RBP19.28■□□□□ 0.68
TM6SF1-201ENST00000258909 SPTY2D1-AS1A0A0U1RR47 76 aa19.27■□□□□ 0.67
TM6SF1-201ENST00000258909 ZSCAN5CA6NGD5 496 aaPredicted RBP19.27■□□□□ 0.67
TM6SF1-201ENST00000258909 LRRC53A6NM62 1247 aa19.27■□□□□ 0.67
TM6SF1-201ENST00000258909 IGSF6O95976 241 aa19.27■□□□□ 0.67
TM6SF1-201ENST00000258909 CCDC172P0C7W6 258 aa19.27■□□□□ 0.67
TM6SF1-201ENST00000258909 SEMG2Q02383 582 aa19.27■□□□□ 0.67
TM6SF1-201ENST00000258909 DCP2Q8IU60 420 aaKnown RBP19.27■□□□□ 0.67
TM6SF1-201ENST00000258909 DCBLD2Q96PD2 775 aa19.27■□□□□ 0.67
TM6SF1-201ENST00000258909 OSBPL1AQ9BXW6 950 aa19.27■□□□□ 0.67
TM6SF1-201ENST00000258909 CATSPERBQ9H7T0 1116 aa19.27■□□□□ 0.67
TM6SF1-201ENST00000258909 KLF15Q9UIH9 416 aa19.27■□□□□ 0.67
TM6SF1-201ENST00000258909 AK5Q9Y6K8 562 aa19.27■□□□□ 0.67
TM6SF1-201ENST00000258909 AREL1O15033 823 aa19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 MMP20O60882 483 aa19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 RABIFP47224 123 aa19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 YBEYP58557 167 aaPredicted RBP19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 TPI1P60174 286 aa19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 MAMLD1Q13495 774 aa19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 SERINC3Q13530 473 aa19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 CYTH1Q15438 398 aa19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 CA9Q16790 459 aa19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 INO80DQ53TQ3 878 aaPredicted RBP19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 PDZD3Q86UT5 571 aa19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 VPS36Q86VN1 386 aa19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 UMODL1-AS1Q8N2C9 162 aa19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 FAM174AQ8TBP5 190 aa19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 NXPE2Q96DL1 559 aa19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 IFT43Q96FT9 208 aa19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 CELF6Q96J87 481 aaKnown RBP19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 APOLD1Q96LR9 279 aa19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 LENG8Q96PV6 779 aaPredicted RBP19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 WRAP53Q9BUR4 548 aaKnown RBP19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 NAT10Q9H0A0 1025 aaKnown RBP19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 CLCA2Q9UQC9 943 aa19.26■□□□□ 0.67
TM6SF1-201ENST00000258909 WASH4PA8MWX3 477 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 J3KR12 359 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 K7ESM1 405 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 SCAMP1O15126 338 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 PIGNO95427 931 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 TIMP2P16035 220 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 PSMA2P25787 234 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 AIF1P55008 147 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 HNRNPKP61978 463 aaKnown RBP eCLIP19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 RAD51Q06609 339 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 PARP15Q460N3 678 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 E4F1Q66K89 784 aaPredicted RBP19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 PARGQ86W56 976 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 ZNF548Q8NEK5 533 aaPredicted RBP19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 CASKIN2Q8WXE0 1202 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 CRELD1Q96HD1 420 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 TRIM7Q9C029 511 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 DHX35Q9H5Z1 703 aaKnown RBP19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 HAUS4Q9H6D7 363 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 NLGN3Q9NZ94 848 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 LHX3Q9UBR4 397 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 PCSK1NQ9UHG2 260 aa19.25■□□□□ 0.67
TM6SF1-201ENST00000258909 LRRK1Q38SD2 2015 aa19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 ASXL3Q9C0F0 2248 aa19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 NEMP2A6NFY4 417 aa19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 CSF2P04141 144 aa19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 ALPPL2P10696 532 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms