RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 MTMR10Q9NXD2 777 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 IGSF9Q9P2J2 1179 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 DNAJB4Q9UDY4 337 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 FAM50BQ9Y247 325 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 BTRCQ9Y297 605 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 IPPQ9Y573 584 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 ANGPTL3Q9Y5C1 460 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 PPP2R3BQ9Y5P8 575 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 ANKRD12Q6UB98 2062 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 UTRNP46939 3433 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 TTC24A2A3L6 582 aaPredicted RBP4.79□□□□□ -1.64
USP44-201ENST00000258499 TRIM38O00635 465 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 GSTA4O15217 222 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 BNIP3LO60238 219 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 DLX3O60479 287 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 TADA2AO75478 443 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 SNRPB2P08579 225 aaKnown RBP4.79□□□□□ -1.64
USP44-201ENST00000258499 ZNF23P17027 643 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 PSMA4P25789 261 aaKnown RBP4.79□□□□□ -1.64
USP44-201ENST00000258499 CA8P35219 290 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 CPOXP36551 454 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 CD86P42081 329 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 BRCC3P46736 316 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 GALK1P51570 392 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 USP46P62068 366 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 CDC42EP1Q00587 391 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 NIPAL4Q0D2K0 466 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 CAPRIN1Q14444 709 aaKnown RBP4.79□□□□□ -1.64
USP44-201ENST00000258499 C16orf72Q14CZ0 275 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 SNX17Q15036 470 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 NEDD8Q15843 81 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 GNASQ5JWF2 1037 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 PKN3Q6P5Z2 889 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 C16orf87Q6PH81 154 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 CNSTQ6PJW8 725 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 CLEC20AQ6ZU45 233 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 SH2D5Q6ZV89 423 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 MAVSQ7Z434 540 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 CUZD1Q86UP6 607 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 HERC6Q8IVU3 1022 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 PGAM4Q8N0Y7 254 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 GPC2Q8N158 579 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 CLEC4FQ8N1N0 589 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 DNAJB14Q8TBM8 379 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 NCLNQ969V3 563 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 RPRD1AQ96P16 312 aaPredicted RBP4.79□□□□□ -1.64
USP44-201ENST00000258499 FAM193BQ96PV7 902 aaPredicted RBP4.79□□□□□ -1.64
USP44-201ENST00000258499 DRC3Q9H069 523 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 VRTNQ9H8Y1 702 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 LIN28AQ9H9Z2 209 aaKnown RBP4.79□□□□□ -1.64
USP44-201ENST00000258499 RGS18Q9NS28 235 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 ADARB2Q9NS39 739 aaKnown RBP4.79□□□□□ -1.64
USP44-201ENST00000258499 SLC38A7Q9NVC3 462 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 RCOR3Q9P2K3 495 aaPredicted RBP4.79□□□□□ -1.64
USP44-201ENST00000258499 ANKRD6Q9Y2G4 727 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 COPG1Q9Y678 874 aaKnown RBP4.79□□□□□ -1.64
USP44-201ENST00000258499 SF3B1O75533 1304 aaKnown RBP eCLIP4.79□□□□□ -1.64
USP44-201ENST00000258499 PABPN1LA6NDY0 278 aaKnown RBP4.79□□□□□ -1.64
USP44-201ENST00000258499 C9IYK1 514 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 MATN2O00339 956 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 E2F6O75461 281 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 RHOBTB1O94844 696 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 RBP1P09455 135 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 SMPD1P17405 629 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 NFKBIAP25963 317 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 HADHAP40939 763 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 LHX1P48742 406 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 GLUD2P49448 558 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 HARS2P49590 506 aaKnown RBP4.79□□□□□ -1.64
USP44-201ENST00000258499 CDH15P55291 814 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 WNT3AP56704 352 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 GJA9P57773 515 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 SOX4Q06945 474 aaPredicted RBP4.79□□□□□ -1.64
USP44-201ENST00000258499 EFEMP1Q12805 493 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 NFYCQ13952 458 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 CEACAM7Q14002 265 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 ADGRE1Q14246 886 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 MFSD10Q14728 455 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 CYP51A1Q16850 503 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 MARC1Q5VT66 337 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 ARHGAP36Q6ZRI8 547 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 GPR141Q7Z602 305 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 TLK2Q86UE8 772 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 ZC3HC1Q86WB0 502 aaKnown RBP4.79□□□□□ -1.64
USP44-201ENST00000258499 NPWQ8N729 165 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 RNF217Q8TC41 542 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 TRPC4APQ8TEL6 797 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 DLG3Q92796 817 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 KHSRPQ92945 711 aaKnown RBP eCLIP4.79□□□□□ -1.64
USP44-201ENST00000258499 HDAC10Q969S8 669 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 SMARCD1Q96GM5 515 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 ZFRQ96KR1 1074 aaKnown RBP4.79□□□□□ -1.64
USP44-201ENST00000258499 FCRL2Q96LA5 508 aaPredicted RBP4.79□□□□□ -1.64
USP44-201ENST00000258499 TEKT5Q96M29 485 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 CAMKK2Q96RR4 588 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 VAT1Q99536 393 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 SLC25A23Q9BV35 468 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 ABHD16BQ9H3Z7 469 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 COQ10BQ9H8M1 238 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 SPC25Q9HBM1 224 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms