RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 GALNT2Q10471 571 aa12.75□□□□□ -0.37
RAB3IP-201ENST00000247833 GPR162Q16538 588 aa12.75□□□□□ -0.37
RAB3IP-201ENST00000247833 CLEC6AQ6EIG7 209 aa12.75□□□□□ -0.37
RAB3IP-201ENST00000247833 ARPINQ7Z6K5 226 aa12.75□□□□□ -0.37
RAB3IP-201ENST00000247833 PDSS2Q86YH6 399 aa12.75□□□□□ -0.37
RAB3IP-201ENST00000247833 CEP70Q8NHQ1 597 aa12.75□□□□□ -0.37
RAB3IP-201ENST00000247833 GABPB2Q8TAK5 448 aaPredicted RBP12.75□□□□□ -0.37
RAB3IP-201ENST00000247833 GPR22Q99680 433 aa12.75□□□□□ -0.37
RAB3IP-201ENST00000247833 PCDHAC1Q9H158 963 aa12.75□□□□□ -0.37
RAB3IP-201ENST00000247833 NDFIP2Q9NV92 336 aa12.75□□□□□ -0.37
RAB3IP-201ENST00000247833 SF3B1O75533 1304 aaKnown RBP eCLIP12.75□□□□□ -0.37
RAB3IP-201ENST00000247833 PSMD3O43242 534 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 CD52P31358 61 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 EFEMP1Q12805 493 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 LIN52Q52LA3 116 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 KRT80Q6KB66 452 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 DCLRE1AQ6PJP8 1040 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 OR52K2Q8NGK3 314 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 RP9Q8TA86 221 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 KATNAL1Q9BW62 490 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 GRIP2Q9C0E4 1043 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 BRD8Q9H0E9 1235 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 OR51F1A6NGY5 319 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 TNPO2O14787 897 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 UBDO15205 165 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 HLA-DQB2P05538 268 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 MTTPP55157 894 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 FASTKQ14296 549 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 PITRM1Q5JRX3 1037 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 C6orf52Q5T4I8 152 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 SETD3Q86TU7 594 aaPredicted RBP12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 SATL1Q86VE3 508 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 TMEM86AQ8N2M4 240 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 DIS3LQ8TF46 1054 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 STK39Q9UEW8 545 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 PSMD13Q9UNM6 376 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 ANKRD6Q9Y2G4 727 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 AP3B1O00203 1094 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 GRB14Q14449 540 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 AGAP9Q5VTM2 703 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 C2orf69Q8N8R5 385 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 PDCD6IPQ8WUM4 868 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 KATNBL1Q9H079 304 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 PRDM16Q9HAZ2 1276 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 DSEQ9UL01 958 aa12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 COPG1Q9Y678 874 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-201ENST00000247833 RGPD3A6NKT7 1758 aaPredicted RBP12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 RGPD4Q7Z3J3 1758 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 hCG_2014768A0A024R1R8 64 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 CCDC189A1A4V9 331 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 TRPC5OSA6NMA1 111 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 OR6B1O95007 311 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 CLPTM1O96005 669 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 FESP07332 822 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 GFAPP14136 432 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 CHN2P52757 468 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 MAP7Q14244 749 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 CMPK2Q5EBM0 449 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 METTL21CQ5VZV1 264 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 AMIGO2Q86SJ2 522 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 IFT43Q96FT9 208 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 SPON2Q9BUD6 331 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 NACA2Q9H009 215 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 AP4B1Q9Y6B7 739 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 ANK1P16157 1881 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 TNS1Q9HBL0 1735 aaKnown RBP12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 F8W810 466 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 ZNF195O14628 629 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 GABRB3P28472 473 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 MRPS6P82932 125 aaKnown RBP12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 ROR2Q01974 943 aaKnown RBP12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 NSUN2Q08J23 767 aaKnown RBP eCLIP12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 DDR2Q16832 855 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 SLC39A12Q504Y0 691 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 ZNF789Q5FWF6 425 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 RNF111Q6ZNA4 994 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 CENPLQ8N0S6 344 aaPredicted RBP12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 TXNDC5Q8NBS9 432 aaKnown RBP12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 TRAPPC9Q96Q05 1148 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 SLC39A3Q9BRY0 314 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 SPC25Q9HBM1 224 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 SPON1Q9HCB6 807 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 RRN3Q9NYV6 651 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 VTI1BQ9UEU0 232 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 V9GYQ6 96 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 AKAP10O43572 662 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 SEC24DO94855 1032 aaPredicted RBP12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 HADHAP40939 763 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 PSME3P61289 254 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 ARHGAP18Q8N392 663 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 TRIML2Q8N7C3 387 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 OR9I1Q8NGQ6 314 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 CASP10Q92851 521 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 ATP6V1E2Q96A05 226 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 PPP1R10Q96QC0 940 aaKnown RBP12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 TMLHEQ9NVH6 421 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 DDX18Q9NVP1 670 aaKnown RBP12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 TCAF1Q9Y4C2 921 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 PTCH2Q9Y6C5 1203 aa12.73□□□□□ -0.37
RAB3IP-201ENST00000247833 RBM47A0AV96 593 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms