RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 TRNP1Q6NT89 227 aa13.84□□□□□ -0.19
NCLN-201ENST00000246117 NAPRTQ6XQN6 538 aa13.84□□□□□ -0.19
NCLN-201ENST00000246117 C11orf74Q86VG3 221 aa13.84□□□□□ -0.19
NCLN-201ENST00000246117 RIN3Q8TB24 985 aa13.84□□□□□ -0.19
NCLN-201ENST00000246117 RAET1EQ8TD07 263 aa13.84□□□□□ -0.19
NCLN-201ENST00000246117 RBBP8Q99708 897 aa13.84□□□□□ -0.19
NCLN-201ENST00000246117 ATP13A1Q9HD20 1204 aa13.84□□□□□ -0.19
NCLN-201ENST00000246117 NMRK2Q9NPI5 230 aa13.84□□□□□ -0.19
NCLN-201ENST00000246117 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.84□□□□□ -0.19
NCLN-201ENST00000246117 ZNHIT2Q9UHR6 403 aa13.84□□□□□ -0.19
NCLN-201ENST00000246117 MYH9P35579 1960 aaKnown RBP13.83□□□□□ -0.19
NCLN-201ENST00000246117 A0A1W2PQH9 124 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 MAGEB16A2A368 324 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 SYNCRIPO60506 623 aaKnown RBP13.83□□□□□ -0.19
NCLN-201ENST00000246117 SLC2A3P11169 496 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 VCLP18206 1134 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 XRCC1P18887 633 aaPredicted RBP13.83□□□□□ -0.19
NCLN-201ENST00000246117 CDK7P50613 346 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 LAMB3Q13751 1172 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 ARHGEF7Q14155 803 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 DPYSL2Q16555 572 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 TEDDM1Q5T9Z0 273 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 SAPCD2Q86UD0 394 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 CACUL1Q86Y37 369 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 FBXW8Q8N3Y1 598 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 CATSPER1Q8NEC5 780 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 MAML3Q96JK9 1138 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 ZFP14Q9HCL3 533 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 WWOXQ9NZC7 414 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 AP4S1Q9Y587 144 aa13.83□□□□□ -0.19
NCLN-201ENST00000246117 BIRC5O15392 142 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 CCNT2O60583 730 aaKnown RBP13.83□□□□□ -0.2
NCLN-201ENST00000246117 SNUPNO95149 360 aaKnown RBP13.83□□□□□ -0.2
NCLN-201ENST00000246117 SIX3O95343 332 aaPredicted RBP13.83□□□□□ -0.2
NCLN-201ENST00000246117 AP2A1O95782 977 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 PYGLP06737 847 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 TPSB2P20231 275 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 RGS2P41220 211 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 LIMK2P53671 638 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 PPP1R8Q12972 351 aaKnown RBP13.83□□□□□ -0.2
NCLN-201ENST00000246117 TPSAB1Q15661 275 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 TMEM110Q86TL2 294 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 PQLC1Q8N2U9 271 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 METTL6Q8TCB7 284 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 MAGEC3Q8TD91 643 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 GFM2Q969S9 779 aaKnown RBP13.83□□□□□ -0.2
NCLN-201ENST00000246117 CRLS1Q9UJA2 301 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 SNX5Q9Y5X3 404 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 PLCH1Q4KWH8 1693 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 C15orf38-AP3S2A0A0A6YYH1 394 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.83□□□□□ -0.2
NCLN-201ENST00000246117 DAB1O75553 588 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 NR4A1P22736 598 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 GGT5P36269 586 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 PPARGP37231 505 aaPredicted RBP13.83□□□□□ -0.2
NCLN-201ENST00000246117 AFF1P51825 1210 aaKnown RBP13.83□□□□□ -0.2
NCLN-201ENST00000246117 DLG1Q12959 904 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 ZBTB17Q13105 803 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 ZNF177Q13360 481 aaPredicted RBP13.83□□□□□ -0.2
NCLN-201ENST00000246117 CDH18Q13634 790 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 PTPRNQ16849 979 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 POM121L1PQ3SYA9 428 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 ATP6AP1LQ52LC2 224 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 LPCAT2Q7L5N7 544 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 ARPINQ7Z6K5 226 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 STK32CQ86UX6 486 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 FAM162AQ96A26 154 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 RHOJQ9H4E5 214 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 RERGLQ9H628 205 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 MRPL40Q9NQ50 206 aaKnown RBP13.83□□□□□ -0.2
NCLN-201ENST00000246117 CIDEBQ9UHD4 219 aa13.83□□□□□ -0.2
NCLN-201ENST00000246117 ALBP02768 609 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 CKMP06732 381 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 CKMT2P17540 419 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 CTPS1P17812 591 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 CCNFP41002 786 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 THOP1P52888 689 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 LRRC74AQ0VAA2 488 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 TRAF2Q12933 501 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 VPS26BQ4G0F5 336 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 TIGD2Q4W5G0 525 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 TIGD5Q53EQ6 642 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 GRAMD4Q6IC98 578 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 SATL1Q86VE3 508 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 SLC44A2Q8IWA5 706 aaPredicted RBP13.82□□□□□ -0.2
NCLN-201ENST00000246117 GLOD4Q9HC38 313 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 FZD10Q9ULW2 581 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 NDUFAF1Q9Y375 327 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 AP3B1O00203 1094 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 ATG7O95352 703 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 SLC2A4P14672 509 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 ELNP15502 786 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 PTPN9P43378 593 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 OXCT1P55809 520 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 LINGO4Q6UY18 593 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 FBXO30Q8TB52 745 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 HEXDCQ8WVB3 486 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 RSPH1Q8WYR4 309 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 CYLDQ9NQC7 956 aa13.82□□□□□ -0.2
NCLN-201ENST00000246117 GID8Q9NWU2 228 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms