RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 YIPF2Q9BWQ6 316 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 ARHGEF4Q9NR80 690 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 CACNA2D2Q9NY47 1150 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 COPG2Q9UBF2 871 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 CDV3Q9UKY7 258 aaKnown RBP17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 LINC00032P0C843 101 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 DDX5P17844 614 aaKnown RBP17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 S100A3P33764 101 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 GRIA1P42261 906 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 HADHBP55084 474 aaKnown RBP17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 HPCAP84074 193 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 PSMD5Q16401 504 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 OR6K2Q8NGY2 324 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 ZYG11BQ9C0D3 744 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 RHOJQ9H4E5 214 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 RIBC2Q9H4K1 309 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 TMEM216Q9P0N5 145 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 ADAM28Q9UKQ2 775 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 TMCC3Q9ULS5 477 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 TOPAZ1Q8N9V7 1692 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 NALCNQ8IZF0 1738 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 PLIN4Q96Q06 1357 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 RGPD8O14715 1765 aaPredicted RBP17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 A0A087X1B8 175 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 DHX15O43143 795 aaKnown RBP17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 MTA2O94776 668 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 ATG7O95352 703 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 MT-CYBP00156 380 aaPredicted RBP17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 IL1R2P27930 398 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 FBXW4P57775 412 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 PTP4A2Q12974 167 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 SKIV2LQ15477 1246 aaKnown RBP17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 CCDC142Q17RM4 750 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 ARL13AQ5H913 290 aaPredicted RBP17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 STXBP5Q5T5C0 1151 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 DENND1CQ8IV53 801 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 TBC1D19Q8N5T2 526 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 TMEM159Q96B96 161 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 MRPL57Q9BQC6 102 aaKnown RBP17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 PALMDQ9NP74 551 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 INVSQ9Y283 1065 aa17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 ATXN2Q99700 1313 aaKnown RBP17.29■□□□□ 0.36
SLC1A4-201ENST00000234256 COL1A1P02452 1464 aaPredicted RBP17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 TCRBV7S3A2A0A539 114 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 KPNA3O00505 521 aaPredicted RBP17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 RASSF9O75901 435 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 F7P08709 466 aaPredicted RBP17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 CHN2P52757 468 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 DEFA1P59665 94 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 DEFA3P59666 94 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 POM121L1PQ3SYA9 428 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 NXNL1Q96CM4 212 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 SPATA16Q9BXB7 569 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 MIEF1Q9NQG6 463 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 TAS2R1Q9NYW7 299 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 PCDHB9Q9Y5E1 797 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 C2CD4BA6NLJ0 364 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 TK2O00142 265 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 HOXA2O43364 376 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 MAPK1P28482 360 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 CLCN5P51795 746 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 GAD2Q05329 585 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 SAPCD2Q86UD0 394 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 SELENOMQ8WWX9 145 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 SLC17A6Q9P2U8 582 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 PCDHGC3Q9UN70 934 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 MLNP12872 115 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 MRPS6P82932 125 aaKnown RBP17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 BTG3Q14201 252 aaPredicted RBP17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 CRY1Q16526 586 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 TIGD2Q4W5G0 525 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 PIGWQ7Z7B1 504 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 HEATR4Q86WZ0 1026 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 RSPH1Q8WYR4 309 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 C9orf16Q9BUW7 83 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 ANAPC2Q9UJX6 822 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 TSC22D4Q9Y3Q8 395 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 CNTNAP1P78357 1384 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 METTL18O95568 372 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 ATP5BP06576 529 aaKnown RBP17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 CYP2C18P33260 490 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 ZNF135P52742 658 aaPredicted RBP17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 RALGDSQ12967 914 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 CPSF6Q16630 551 aaKnown RBP eCLIP17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 SLC26A9Q7LBE3 791 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 ZNF572Q7Z3I7 529 aaPredicted RBP17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 LENG8Q96PV6 779 aaPredicted RBP17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 TWNKQ96RR1 684 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 KLHL25Q9H0H3 589 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 GLOD4Q9HC38 313 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 ZNF358Q9NW07 568 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 SNED1Q8TER0 1413 aa17.28■□□□□ 0.36
SLC1A4-201ENST00000234256 CTPS1P17812 591 aa17.27■□□□□ 0.36
SLC1A4-201ENST00000234256 CRHR1P34998 444 aa17.27■□□□□ 0.36
SLC1A4-201ENST00000234256 GRM3Q14832 879 aa17.27■□□□□ 0.36
SLC1A4-201ENST00000234256 ARHGAP15Q53QZ3 475 aa17.27■□□□□ 0.36
SLC1A4-201ENST00000234256 SPESP1Q6UW49 350 aa17.27■□□□□ 0.36
SLC1A4-201ENST00000234256 GK5Q6ZS86 529 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms