RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 ATP9BO43861 1147 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 PPFIA2O75334 1257 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 SUN1O94901 812 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 MT-CYBP00156 380 aaPredicted RBP16.79■□□□□ 0.28
POLR2E-201ENST00000215587 GSRP00390 522 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 SRFP11831 508 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 GLULP15104 373 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 CA4P22748 312 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 CTHP32929 405 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 RECQLP46063 649 aaPredicted RBP16.79■□□□□ 0.28
POLR2E-201ENST00000215587 RGRP47804 291 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 CSNK1DP48730 415 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 SNRPD1P62314 119 aaKnown RBP16.79■□□□□ 0.28
POLR2E-201ENST00000215587 SKOR1P84550 965 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 MESP2Q0VG99 397 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 DLG2Q15700 870 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 FNDC3BQ53EP0 1204 aaKnown RBP16.79■□□□□ 0.28
POLR2E-201ENST00000215587 ATXN7L2Q5T6C5 722 aaPredicted RBP16.79■□□□□ 0.28
POLR2E-201ENST00000215587 KCTD11Q693B1 232 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 CENPUQ71F23 418 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 SRLQ86TD4 932 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 PRPF39Q86UA1 669 aaKnown RBP16.79■□□□□ 0.28
POLR2E-201ENST00000215587 RNF135Q8IUD6 432 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 PDIK1LQ8N165 341 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 KDM1BQ8NB78 822 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 AENQ8WTP8 325 aaKnown RBP16.79■□□□□ 0.28
POLR2E-201ENST00000215587 SORCS1Q8WY21 1168 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 MSANTD3Q96H12 275 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 TBL1YQ9BQ87 522 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 FICDQ9BVA6 458 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 PHACTR1Q9C0D0 580 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 TNKS2Q9H2K2 1166 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 NOD2Q9HC29 1040 aa16.79■□□□□ 0.28
POLR2E-201ENST00000215587 TTC24A2A3L6 582 aaPredicted RBP16.78■□□□□ 0.28
POLR2E-201ENST00000215587 MMP2P08253 660 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 FAM153BP0C7A2 387 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 MLNP12872 115 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 H2AFXP16104 143 aaPredicted RBP16.78■□□□□ 0.28
POLR2E-201ENST00000215587 CR2P20023 1033 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 WNT3AP56704 352 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 SPARCL1Q14515 664 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 SLMAPQ14BN4 828 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 PCSK7Q16549 785 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 FAM153CQ494X1 144 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 DNAJC21Q5F1R6 531 aaKnown RBP16.78■□□□□ 0.28
POLR2E-201ENST00000215587 KDELC1Q6UW63 502 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 RYBPQ8N488 228 aaPredicted RBP16.78■□□□□ 0.28
POLR2E-201ENST00000215587 OR2AP1Q8NGE2 309 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 HNRNPLLQ8WVV9 542 aaKnown RBP16.78■□□□□ 0.28
POLR2E-201ENST00000215587 TADA1Q96BN2 335 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 IFT43Q96FT9 208 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 MRGPRX3Q96LB0 322 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 SLC2A4RGQ9NR83 387 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 HEBP1Q9NRV9 189 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 SLCO3A1Q9UIG8 710 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 TICRRQ7Z2Z1 1910 aa16.78■□□□□ 0.28
POLR2E-201ENST00000215587 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.77■□□□□ 0.28
POLR2E-201ENST00000215587 EIF3HO15372 352 aaKnown RBP eCLIP16.77■□□□□ 0.28
POLR2E-201ENST00000215587 NARSO43776 548 aaKnown RBP16.77■□□□□ 0.28
POLR2E-201ENST00000215587 TNFRSF4P43489 277 aa16.77■□□□□ 0.28
POLR2E-201ENST00000215587 GALK1P51570 392 aa16.77■□□□□ 0.28
POLR2E-201ENST00000215587 ZP2Q05996 745 aa16.77■□□□□ 0.28
POLR2E-201ENST00000215587 RAD51Q06609 339 aa16.77■□□□□ 0.28
POLR2E-201ENST00000215587 CARD16Q5EG05 197 aa16.77■□□□□ 0.28
POLR2E-201ENST00000215587 DGKKQ5KSL6 1271 aa16.77■□□□□ 0.28
POLR2E-201ENST00000215587 LRRC8BQ6P9F7 803 aa16.77■□□□□ 0.28
POLR2E-201ENST00000215587 FBXO38Q6PIJ6 1188 aa16.77■□□□□ 0.28
POLR2E-201ENST00000215587 Q6ZVU0 165 aa16.77■□□□□ 0.28
POLR2E-201ENST00000215587 PLPP6Q8IY26 295 aa16.77■□□□□ 0.28
POLR2E-201ENST00000215587 DNAAF3Q8N9W5 541 aa16.77■□□□□ 0.28
POLR2E-201ENST00000215587 CAVIN3Q969G5 261 aa16.77■□□□□ 0.28
POLR2E-201ENST00000215587 SERPINB12Q96P63 405 aa16.77■□□□□ 0.28
POLR2E-201ENST00000215587 ARFGAP3Q9NP61 516 aa16.77■□□□□ 0.28
POLR2E-201ENST00000215587 COL4A2P08572 1712 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 TTC34A8MYJ7 566 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 BNIP3LO60238 219 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 USP12O75317 370 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 GJB3O75712 270 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 DHX9Q08211 1270 aaKnown RBP16.76■□□□□ 0.27
POLR2E-201ENST00000215587 CDH17Q12864 832 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 PDIA2Q13087 525 aaKnown RBP16.76■□□□□ 0.27
POLR2E-201ENST00000215587 ZNF234Q14588 700 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 PTPRNQ16849 979 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 BBS9Q3SYG4 887 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 NCEH1Q6PIU2 408 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 TMC3Q7Z5M5 1100 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 FRS2Q8WU20 508 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 FEM1CQ96JP0 617 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 MRGPRX2Q96LB1 330 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 PWWP2AQ96N64 755 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 TUBGCP5Q96RT8 1024 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 APOL2Q9BQE5 337 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 ATP13A3Q9H7F0 1226 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 SAYSD1Q9NPB0 183 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 CASS4Q9NQ75 786 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 EVLQ9UI08 416 aaPredicted RBP16.76■□□□□ 0.27
POLR2E-201ENST00000215587 ZNF318Q5VUA4 2279 aa16.76■□□□□ 0.27
POLR2E-201ENST00000215587 EDDM13A0A1B0GTR0 161 aa16.75■□□□□ 0.27
POLR2E-201ENST00000215587 NPC1O15118 1278 aa16.75■□□□□ 0.27
POLR2E-201ENST00000215587 ZNF821O75541 412 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms