RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 PCID2Q5JVF3 399 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 NEPROQ6NW34 567 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 TMEM151AQ8N4L1 468 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 STYXQ8WUJ0 223 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 CASP10Q92851 521 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 SERPINI1Q99574 410 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 VCX3BQ9H321 246 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 SPON1Q9HCB6 807 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 FBRSL1Q9HCM7 1045 aaKnown RBP8.38□□□□□ -1.07
CDC27-201ENST00000066544 STK39Q9UEW8 545 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 BRCA1P38398 1863 aaKnown RBP8.38□□□□□ -1.07
CDC27-201ENST00000066544 ERI2A8K979 691 aaKnown RBP8.38□□□□□ -1.07
CDC27-201ENST00000066544 TMEM114B3SHH9 223 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 F9P00740 461 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 CCDC166P0CW27 439 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 ARNTP27540 789 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 LRPAP1P30533 357 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 CDC42EP1Q00587 391 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 PTK2BQ14289 1009 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 CYTH1Q15438 398 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 TSTD2Q5T7W7 516 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 AP1ARQ63HQ0 302 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 TRPC7Q9HCX4 862 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 ABI2Q9NYB9 513 aaPredicted RBP8.38□□□□□ -1.07
CDC27-201ENST00000066544 MID2Q9UJV3 735 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 GNEQ9Y223 722 aaKnown RBP8.38□□□□□ -1.07
CDC27-201ENST00000066544 KCTD3Q9Y597 815 aa8.38□□□□□ -1.07
CDC27-201ENST00000066544 CD151P48509 253 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 C16orf89Q6UX73 402 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 BHLHA9Q7RTU4 235 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 LILRA2Q8N149 483 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 GALNT15Q8N3T1 639 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 ATP6V1E2Q96A05 226 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 PKP2Q99959 881 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 MRPL46Q9H2W6 279 aaKnown RBP8.37□□□□□ -1.07
CDC27-201ENST00000066544 PSMD13Q9UNM6 376 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 A0A1B0GTW7 788 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 MAGEB16A2A368 324 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 ME2P23368 584 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 PCSK1P29120 753 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 WNT3AP56704 352 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 AGMOQ6ZNB7 445 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 MIB1Q86YT6 1006 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 ARHGAP12Q8IWW6 846 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 KDM1BQ8NB78 822 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 OR10T2Q8NGX3 314 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 PRPF18Q99633 342 aaKnown RBP8.37□□□□□ -1.07
CDC27-201ENST00000066544 CENPKQ9BS16 269 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 EFCAB1Q9HAE3 211 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 PLXNA1Q9UIW2 1896 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 SUPT7LO94864 414 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 CPB1P15086 417 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 CD52P31358 61 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 SCAPQ12770 1279 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 FSCN1Q16658 493 aaKnown RBP8.37□□□□□ -1.07
CDC27-201ENST00000066544 XKR4Q5GH76 650 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 CWF19L1Q69YN2 538 aaKnown RBP8.37□□□□□ -1.07
CDC27-201ENST00000066544 BNIPLQ7Z465 357 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 SH3RF2Q8TEC5 729 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 OLFM1Q99784 485 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 KIFC1Q9BW19 673 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 DNAJB4Q9UDY4 337 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 IPO11Q9UI26 975 aaKnown RBP8.37□□□□□ -1.07
CDC27-201ENST00000066544 LOC285556D6RIA3 1793 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 HHLA1C9JL84 531 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 TPST1O60507 370 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 YWHAQP27348 245 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 ARPP19P56211 112 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 PDAP1Q13442 181 aaKnown RBP8.37□□□□□ -1.07
CDC27-201ENST00000066544 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDC27-201ENST00000066544 DENND5AQ6IQ26 1287 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 AMIGO2Q86SJ2 522 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 PIM3Q86V86 326 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 CIR1Q86X95 450 aaPredicted RBP8.37□□□□□ -1.07
CDC27-201ENST00000066544 OR52K2Q8NGK3 314 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 B3GALT6Q96L58 329 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 SH3GL3Q99963 347 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 TRIM8Q9BZR9 551 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 GRIP2Q9C0E4 1043 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 ALG9Q9H6U8 611 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 NCKIPSDQ9NZQ3 722 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 AAR2Q9Y312 384 aaKnown RBP8.37□□□□□ -1.07
CDC27-201ENST00000066544 AP4B1Q9Y6B7 739 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 GJB3O75712 270 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 CD86P42081 329 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 ROR2Q01974 943 aaKnown RBP8.37□□□□□ -1.07
CDC27-201ENST00000066544 BIRC2Q13490 618 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 METTL21CQ5VZV1 264 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 DCLRE1AQ6PJP8 1040 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 LIMS2Q7Z4I7 341 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 LINC00523Q86TU6 105 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 RP9Q8TA86 221 aaKnown RBP8.37□□□□□ -1.07
CDC27-201ENST00000066544 PPWD1Q96BP3 646 aaKnown RBP8.37□□□□□ -1.07
CDC27-201ENST00000066544 RTP3Q9BQQ7 232 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 NMUR1Q9HB89 426 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 UBAP1Q9NZ09 502 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 CDH9Q9ULB4 789 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 PTGDR2Q9Y5Y4 395 aa8.37□□□□□ -1.07
CDC27-201ENST00000066544 BPTFQ12830 3046 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 E7ENX8 843 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms