RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Dsg3O35902 993 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Rdh7O88451 316 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 TnfP06804 235 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Cyp2b10P12791 500 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Slc12a1P55014 1095 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 HpcaP84075 193 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Pld2P97813 933 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Gpr174Q3U507 335 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Ntrk1Q3UFB7 799 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Ankrd13bQ5F259 626 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Mfsd3Q5U419 412 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Armcx2Q6A058 784 aaKnown RBP11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 HltfQ6PCN7 1003 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Deup1Q7M6Y5 601 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Hsfy2Q80Y37 392 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Atp6v1g3Q8BMC1 118 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Tlk1Q8C0V0 766 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Ppp4r1Q8K2V1 951 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Syap1Q9D5V6 365 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Dus2Q9D7B1 493 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Trbv4A0A075B5I2 113 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Ccdc120A2AEV7 629 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Vmn2r24D3YUI0 854 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 NmbrO54799 390 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Sephs2P97364 452 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Eml1Q05BC3 814 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Nfe2Q07279 373 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Pag1Q3U1F9 429 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Plcl1Q3USB7 1096 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Ubtfl1Q3USZ2 394 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 PostnQ62009 838 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Gpsm1Q6IR34 673 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Olfr212Q7TS33 327 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Eif4bQ8BGD9 611 aaKnown RBP11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Pyhin1Q8BV49 420 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Arhgef33Q8BW86 850 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Tdrd7Q8K1H1 1086 aaKnown RBP11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 LipmQ8K2A6 422 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Mrpl47Q8K2Y7 252 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Tmco1Q921L3 188 aaKnown RBP11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Pard3bQ9CSB4 1203 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Rnft1Q9DCN7 395 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Rnf11Q9QYK7 154 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Morf4l2Q9R0Q4 288 aa11.69□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Ccdc62E9PVD1 701 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Gm5145F8VQ88 278 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 BC024978J3QPC3 361 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Vmn2r61L7N2B8 865 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 P01641 117 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Lamp1P11438 406 aaKnown RBP11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Ap1g1P22892 822 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 RxrgP28705 463 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 YwhaqP68254 245 aaKnown RBP11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Ldb1P70662 411 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Fam35aQ3UEN2 891 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Xpo1Q6P5F9 1071 aaKnown RBP11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Ints7Q7TQK1 966 aaKnown RBP11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Celf3Q8CIN6 465 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 ThtpaQ8JZL3 224 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 GcshQ91WK5 170 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Spock2Q9ER58 423 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Cdkl2Q9QUK0 568 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Cldn3Q9Z0G9 219 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Zscan4eA0A1B0GRE8 505 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Zfp963D3Z2T8 383 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Grip2G3XA20 1042 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Mcpt1P11034 246 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Adcyap1r1P70205 496 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Stt3bQ3TDQ1 823 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Akap14Q3V0I7 536 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Lrrc47Q505F5 581 aaKnown RBP11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 PkdccQ5RJI4 492 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 CybbQ61093 570 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Scd4Q6T707 353 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Gpr139Q80UC8 345 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Entpd3Q8BFW6 529 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Prkaa2Q8BRK8 552 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Sept10Q8C650 452 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Slc47a1Q8K0H1 567 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Gspt1Q8R050 636 aaKnown RBP11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Ace2Q8R0I0 805 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Fbxw7Q8VBV4 629 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 B4galt3Q91YY2 395 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Reep3Q99KK1 254 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 RhojQ9ER71 214 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Cyp3a41aQ9JMA7 504 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Slamf1Q9QUM4 343 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Msl3Q9WVG9 525 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Gm14401A2ARV7 303 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Olfr1145A2AVC7 325 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 DgkdE9PUQ8 1220 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Mthfd2P18155 350 aaKnown RBP11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Stt3aP46978 705 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Kpna2P52293 529 aaKnown RBP11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Oaz1P54369 227 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Treml2Q2LA85 329 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Q32M26 199 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Cyb5r2Q3KNK3 276 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Mpzl3Q3V3F6 237 aa11.68□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Nr1h2Q60644 446 aa11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms