RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Ddx59Q9DBN9 619 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 4930407I10RikD3Z5T8 1512 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Tnfrsf25B1AWN9 411 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Gm3636E9Q5P1 227 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Vmn2r1O70410 912 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 CrtamQ149L7 389 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Kpna1Q60960 538 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 SpidrQ8BGX7 933 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 SgtaQ8BJU0 315 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Pcdhb10Q91VE5 797 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Tma16Q9CR02 221 aaKnown RBP14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 P2rx7Q9Z1M0 595 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Pde4dipQ80YT7 2224 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Olfr564E9PWA8 316 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Cyp2c68K7N6C2 491 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 LipeP54310 759 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Tbc1d10aP58802 500 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Gjb4Q02738 266 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Plk1Q07832 603 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 RhocQ62159 193 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Itga2Q62469 1178 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Tnpo3Q6P2B1 923 aaKnown RBP14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Sephs1Q8BH69 392 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Adgra2Q91ZV8 1336 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Rgsl1H3BL40 1073 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Sstr1P30873 391 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Nkx2-5P42582 318 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Cyp2c40P56657 491 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Serpina6Q06770 397 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Fam98aQ3TJZ6 515 aaKnown RBP14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 A630001G21RikQ3UTB2 229 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 N4bp1Q6A037 893 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Zfp180Q6NZI9 655 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Chst10Q6PGK7 356 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Trim2Q9ESN6 744 aaKnown RBP14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Myom1Q62234 1667 aaKnown RBP14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Fam83cA2ARK0 776 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Sod3O09164 251 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Fkbp8O35465 402 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Alkbh5Q3TSG4 395 aaKnown RBP14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Mars2Q499X9 586 aaKnown RBP14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Arfrp1Q8BXL7 201 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Fbxo43Q8CDI2 640 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Akt1s1Q9D1F4 257 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Myo10F8VQB6 2062 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Mcpt1P11034 246 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 CkbQ04447 381 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Lgals3bpQ07797 577 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Aldh16a1Q571I9 802 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 PnocQ64387 187 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Mgat5Q8R4G6 740 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Smok3aC0HKC8 504 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Smok3bC0HKC9 504 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Naa20P61600 178 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Lilrb3P97484 841 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Zbtb14Q08376 449 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Tgfbr2Q62312 592 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Zcchc4Q8BKW4 512 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Frmd6Q8C0V9 622 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ift80Q8K057 777 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Kct2Q8K201 259 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Clcc1Q99LI2 539 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 MutyhQ99P21 515 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Snrnp48Q9D361 337 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Cacna1cQ01815 2139 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ttc37F8VPK0 1563 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Cbx5Q61686 191 aaKnown RBP14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Tsen34Q8BMZ5 316 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Slc18a2Q8BRU6 517 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Cxcl16Q8BSU2 246 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Prex1Q69ZK0 1650 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Gm17174M0QWQ9 212 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Tmprss11eQ5S248 423 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 PapolgQ6PCL9 739 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Pum1Q80U78 1189 aaKnown RBP14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Pcid2Q8BFV2 399 aaKnown RBP14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Kif12Q9D2Z8 642 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 PlgrktQ9D3P8 147 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Izumo2Q9DA16 220 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Slc13a2Q9ES88 586 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Olfr2Q9QWU6 327 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 B3galt4Q9Z0F0 371 aa14.06□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Rab26Q504M8 260 aa14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ezh2Q61188 746 aaKnown RBP14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Slc26a2Q62273 739 aa14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Rbm22Q8BHS3 420 aaKnown RBP14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Trappc12Q8K2L8 797 aa14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ubr1O70481 1757 aa14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 MaddQ80U28 1577 aa14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Celf5D3Z4T1 395 aaKnown RBP14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 TpmtO55060 240 aa14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Mapkapk3Q3UMW7 384 aa14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 LbpQ61805 481 aa14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Dpysl3Q62188 570 aa14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Gpatch2lQ6PE65 482 aa14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Brat1Q8C3R1 822 aa14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Lrrc40Q9CRC8 602 aa14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Rfc5Q9D0F6 339 aa14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Fam187aQ9D3R5 417 aa14.05□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Cyp2c55Q9D816 490 aa14.05□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms