RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 UBA2Q9UBT2 640 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-216ENST00000641375 SEPT3Q9UH03 358 aa16.66■□□□□ 0.26
PHGDH-216ENST00000641375 COPEO14579 308 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 GREM1O60565 184 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 RFPL1O75677 317 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 FGF19O95750 216 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 ADRA1DP25100 572 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 BMPR2Q13873 1038 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 POU6F1Q14863 301 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 ALG1LQ6GMV1 187 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 LVRNQ6Q4G3 990 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 SPATS2Q86XZ4 545 aaKnown RBP16.65■□□□□ 0.26
PHGDH-216ENST00000641375 FAM217AQ8IXS0 508 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 LRRC34Q8IZ02 419 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 OR52K2Q8NGK3 314 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 TMA16Q96EY4 203 aaKnown RBP16.65■□□□□ 0.26
PHGDH-216ENST00000641375 CORO1BQ9BR76 489 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 ACE2Q9BYF1 805 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-216ENST00000641375 PRKD2Q9BZL6 878 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 C20orf96Q9NUD7 363 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-216ENST00000641375 MKS1Q9NXB0 559 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 A0A1W2PRU2 124 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 HMX2A2RU54 273 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 TCP11X1B4DZS4 312 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 RB1P06400 928 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 PAMP19021 973 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 NMBRP28336 390 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 CCNFP41002 786 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 ZXDBP98169 803 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 SLC1A5Q15758 541 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 TEDDM1Q5T9Z0 273 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 FOXR1Q6PIV2 292 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 HTR3DQ70Z44 454 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 ACMSDQ8TDX5 336 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 PSKH2Q96QS6 385 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 SEMA3CQ99985 751 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 C17orf80Q9BSJ5 609 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 HTATIP2Q9BUP3 242 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 MUC3BQ9H195 1237 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 PRKAG3Q9UGI9 489 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 SH3BP1Q9Y3L3 701 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 TCAF1Q9Y4C2 921 aa16.65■□□□□ 0.26
PHGDH-216ENST00000641375 H0Y626 953 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 CCL16O15467 120 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 TBL1XO60907 577 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 MYL4P12829 197 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 DNAJB1P25685 340 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 SERPINH1P50454 418 aaKnown RBP16.64■□□□□ 0.25
PHGDH-216ENST00000641375 NEK3P51956 506 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 SLC14A2Q15849 920 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 PDK4Q16654 411 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 HSP90AA5PQ58FG0 334 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 CXorf57Q6NSI4 855 aaKnown RBP16.64■□□□□ 0.25
PHGDH-216ENST00000641375 RGS9BPQ6ZS82 235 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 KDELC2Q7Z4H8 507 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 MGME1Q9BQP7 344 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 CINPQ9BW66 212 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-216ENST00000641375 IL1RAPL1Q9NZN1 696 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 PSAT1Q9Y617 370 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 MYLKQ15746 1914 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 HEATR9A2RTY3 570 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 EPOP01588 193 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 ITGA2BP08514 1039 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 SERPINF2P08697 491 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 CES1P23141 567 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 SPRP35270 261 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-216ENST00000641375 QPCTQ16769 361 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 RNF219Q5W0B1 726 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-216ENST00000641375 CPXM2Q8N436 756 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 SLC22A17Q8WUG5 538 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 RANBP9Q96S59 729 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 VPS11Q9H270 941 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 GGA2Q9UJY4 613 aa16.64■□□□□ 0.25
PHGDH-216ENST00000641375 HELZP42694 1942 aaKnown RBP16.63■□□□□ 0.25
PHGDH-216ENST00000641375 LOC285095A0A1B0GVY8 99 aa16.63■□□□□ 0.25
PHGDH-216ENST00000641375 CBX4O00257 560 aa16.63■□□□□ 0.25
PHGDH-216ENST00000641375 GFRA2O00451 464 aa16.63■□□□□ 0.25
PHGDH-216ENST00000641375 CSPG5O95196 566 aa16.63■□□□□ 0.25
PHGDH-216ENST00000641375 LUC7L3O95232 432 aaKnown RBP16.63■□□□□ 0.25
PHGDH-216ENST00000641375 DDX6P26196 483 aaKnown RBP eCLIP16.63■□□□□ 0.25
PHGDH-216ENST00000641375 PDE1BQ01064 536 aa16.63■□□□□ 0.25
PHGDH-216ENST00000641375 MICALCLQ6ZW33 695 aa16.63■□□□□ 0.25
PHGDH-216ENST00000641375 CARNMT1Q8N4J0 409 aa16.63■□□□□ 0.25
PHGDH-216ENST00000641375 SLC25A41Q8N5S1 370 aa16.63■□□□□ 0.25
PHGDH-216ENST00000641375 IFT43Q96FT9 208 aa16.63■□□□□ 0.25
PHGDH-216ENST00000641375 ZNF778Q96MU6 729 aa16.63■□□□□ 0.25
PHGDH-216ENST00000641375 SRPK1Q96SB4 655 aaKnown RBP16.63■□□□□ 0.25
PHGDH-216ENST00000641375 RBBP8Q99708 897 aa16.63■□□□□ 0.25
PHGDH-216ENST00000641375 SLC17A6Q9P2U8 582 aa16.63■□□□□ 0.25
PHGDH-216ENST00000641375 ALADP13716 330 aa16.62■□□□□ 0.25
PHGDH-216ENST00000641375 PTPN2P17706 415 aa16.62■□□□□ 0.25
PHGDH-216ENST00000641375 HLA-DPA1P20036 260 aa16.62■□□□□ 0.25
PHGDH-216ENST00000641375 HOXA9P31269 272 aa16.62■□□□□ 0.25
PHGDH-216ENST00000641375 CHRNA4P43681 627 aa16.62■□□□□ 0.25
PHGDH-216ENST00000641375 EPHA5P54756 1037 aa16.62■□□□□ 0.25
PHGDH-216ENST00000641375 CSE1LP55060 971 aaKnown RBP16.62■□□□□ 0.25
PHGDH-216ENST00000641375 CDH18Q13634 790 aa16.62■□□□□ 0.25
PHGDH-216ENST00000641375 STRA8Q7Z7C7 330 aa16.62■□□□□ 0.25
PHGDH-216ENST00000641375 CACNA2D3Q8IZS8 1091 aa16.62■□□□□ 0.25
PHGDH-216ENST00000641375 LRRC8CQ8TDW0 803 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms