RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	HNRNPR	O43390	633 aa	Known RBP	6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	GUCY1B2	O75343	617 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	TNNT1	P13805	278 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	CHM	P24386	653 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	PRELP	P51888	382 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	DCAF7	P61962	342 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	KPNB1	Q14974	876 aa	Known RBP	6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	WDR45B	Q5MNZ6	344 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	ZNF280D	Q6N043	979 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	SLC39A5	Q6ZMH5	540 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	SYT13	Q7L8C5	426 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	ARMC8	Q8IUR7	673 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	ANKRD44	Q8N8A2	993 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	FSIP1	Q8NA03	581 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	ZUFSP	Q96AP4	578 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	ERP27	Q96DN0	273 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	AGXT2	Q9BYV1	514 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	PDCL3	Q9H2J4	239 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	NSMCE4A	Q9NXX6	385 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	POLK	Q9UBT6	870 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	PCDHA10	Q9Y5I2	948 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	COPG1	Q9Y678	874 aa	Known RBP	6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	CIC	Q96RK0	1608 aa	Predicted RBP	6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	PXDNL	A1KZ92	1463 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	IGSF1	Q8N6C5	1336 aa		6.2	□□□□□ -1.42
NRXN1-223	ENST00000625891	TBC1D3D	A0A087WVF3	549 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	TBC1D3I	A0A087WXS9	549 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	TBC1D3E	A0A087X179	549 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	TBC1D3K	A0A087X1G2	549 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	VWA3A	A6NCI4	1184 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	TBC1D3B	A6NDS4	549 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	TBC1D3F	A6NER0	549 aa	Predicted RBP	6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	AGAP5	A6NIR3	686 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	TBC1D3L	B9A6J9	549 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	PROB1	E7EW31	1015 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	ALDOA	P04075	364 aa	Known RBP	6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	HNRNPA1	P09651	372 aa	Known RBP eCLIP	6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	RFPL3S	P0C7P2	107 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	TBC1D3H	P0C7X1	549 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	PGM1	P36871	562 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	RCAN1	P53805	252 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	SLC37A1	P57057	533 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	SLC10A2	Q12908	348 aa	Predicted RBP	6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	EIF4A2	Q14240	407 aa	Known RBP	6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	GPR68	Q15743	365 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	TBC1D3G	Q6DHY5	549 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	TBC1D3C	Q6IPX1	549 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	KIAA1324	Q6UXG2	1013 aa	Known RBP	6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	ADGRF3	Q8IZF5	1079 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	TBC1D3	Q8IZP1	549 aa	Predicted RBP	6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	ZMIZ2	Q8NF64	920 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	TDRD7	Q8NHU6	1098 aa	Known RBP	6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	TBC1D22A	Q8WUA7	517 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	IGFBPL1	Q8WX77	278 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	CELF1	Q92879	486 aa	Known RBP	6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	KTI12	Q96EK9	354 aa	Predicted RBP	6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	GPR78	Q96P69	363 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	CHCHD6	Q9BRQ6	235 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	EFHD1	Q9BUP0	239 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	SUFU	Q9UMX1	484 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	HEMK1	Q9Y5R4	338 aa	Predicted RBP	6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	CYP46A1	Q9Y6A2	500 aa		6.19	□□□□□ -1.42
NRXN1-223	ENST00000625891	RTL1	A6NKG5	1358 aa		6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	FLT4	P35916	1363 aa		6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	KDR	P35968	1356 aa		6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891		A0A0G2JLW4	131 aa		6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	ZNF500	O60304	480 aa	Predicted RBP	6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	SLC3A2	P08195	630 aa	Known RBP	6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	SOX2	P48431	317 aa		6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	VPS41	P49754	854 aa		6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	NUCB1	Q02818	461 aa		6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	RNASEL	Q05823	741 aa	Known RBP	6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	TBL3	Q12788	808 aa	Known RBP	6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	CC2D1B	Q5T0F9	858 aa	Known RBP	6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	ZNF474	Q6S9Z5	364 aa	Predicted RBP	6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	SRFBP1	Q8NEF9	429 aa	Known RBP	6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	SCARB1	Q8WTV0	552 aa		6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	RNF125	Q96EQ8	232 aa		6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	C5orf34	Q96MH7	638 aa		6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	FCRL5	Q96RD9	977 aa		6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	PIGS	Q96S52	555 aa		6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	TM2D2	Q9BX73	214 aa		6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	ORC3	Q9UBD5	711 aa	Predicted RBP	6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	RNF7	Q9UBF6	113 aa		6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	AFDN	P55196	1824 aa	Known RBP	6.18	□□□□□ -1.42
NRXN1-223	ENST00000625891	SBF1	O95248	1867 aa		6.17	□□□□□ -1.42
NRXN1-223	ENST00000625891	CCDC88A	Q3V6T2	1871 aa		6.17	□□□□□ -1.42
NRXN1-223	ENST00000625891		A0A1W2PPH5	198 aa		6.17	□□□□□ -1.42
NRXN1-223	ENST00000625891	FSD2	A1L4K1	749 aa		6.17	□□□□□ -1.42
NRXN1-223	ENST00000625891	PGPEP1L	A6NFU8	196 aa		6.17	□□□□□ -1.42
NRXN1-223	ENST00000625891	DNAJC9-AS1	A6NH13	148 aa		6.17	□□□□□ -1.42
NRXN1-223	ENST00000625891	CGB1	A6NKQ9	187 aa		6.17	□□□□□ -1.42
NRXN1-223	ENST00000625891	STX16-NPEPL1	H3BU86	382 aa		6.17	□□□□□ -1.42
NRXN1-223	ENST00000625891	STX16	O14662	325 aa		6.17	□□□□□ -1.42
NRXN1-223	ENST00000625891	CNTN5	O94779	1100 aa		6.17	□□□□□ -1.42
NRXN1-223	ENST00000625891	PDCL	Q13371	301 aa		6.17	□□□□□ -1.42
NRXN1-223	ENST00000625891	TOMM20	Q15388	145 aa		6.17	□□□□□ -1.42
NRXN1-223	ENST00000625891	PFKFB3	Q16875	520 aa	Predicted RBP	6.17	□□□□□ -1.42
NRXN1-223	ENST00000625891	SLC9C2	Q5TAH2	1124 aa		6.17	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms