RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, human

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-229	ENST00000621897	CREB3L2	Q70SY1	520 aa		4.63	□□□□□ -1.67
BRCA1-229	ENST00000621897	NR2C2AP	Q86WQ0	139 aa		4.63	□□□□□ -1.67
BRCA1-229	ENST00000621897	TMC8	Q8IU68	726 aa		4.63	□□□□□ -1.67
BRCA1-229	ENST00000621897	ENAH	Q8N8S7	591 aa	Predicted RBP	4.63	□□□□□ -1.67
BRCA1-229	ENST00000621897	SDCCAG3	Q96C92	435 aa		4.63	□□□□□ -1.67
BRCA1-229	ENST00000621897	MSTO1	Q9BUK6	570 aa		4.63	□□□□□ -1.67
BRCA1-229	ENST00000621897	CLK4	Q9HAZ1	481 aa	Known RBP	4.63	□□□□□ -1.67
BRCA1-229	ENST00000621897	PLSCR4	Q9NRQ2	329 aa		4.63	□□□□□ -1.67
BRCA1-229	ENST00000621897	ATP8A2	Q9NTI2	1148 aa		4.63	□□□□□ -1.67
BRCA1-229	ENST00000621897	FBXO40	Q9UH90	709 aa		4.63	□□□□□ -1.67
BRCA1-229	ENST00000621897	CD207	Q9UJ71	328 aa		4.63	□□□□□ -1.67
BRCA1-229	ENST00000621897	FEM1B	Q9UK73	627 aa		4.63	□□□□□ -1.67
BRCA1-229	ENST00000621897	DERA	Q9Y315	318 aa		4.63	□□□□□ -1.67
BRCA1-229	ENST00000621897		A0A1B0GUV1	79 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	LINC01553	A4QN01	128 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	SRRM3	A6NNA2	597 aa	Predicted RBP	4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	KDM4E	B2RXH2	506 aa	Predicted RBP	4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	ITM2A	O43736	263 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	DHX16	O60231	1041 aa	Known RBP	4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	IL1A	P01583	271 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	RXRA	P19793	462 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	HNF1B	P35680	557 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	COMP	P49747	757 aa	Predicted RBP	4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	SEC61A1	P61619	476 aa	Known RBP	4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	RPL36A	P83881	106 aa	Known RBP	4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	SLC18A2	Q05940	514 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	TAF5	Q15542	800 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	CBWD5	Q5RIA9	395 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897		Q6ZTC4	211 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	RASSF8	Q8NHQ8	419 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	FAM216A	Q8WUB2	273 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	SLITRK1	Q96PX8	696 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	PPP1R10	Q96QC0	940 aa	Known RBP	4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	FIZ1	Q96SL8	496 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	FAM167B	Q9BTA0	163 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	PAGR1	Q9BTK6	254 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	IL25	Q9H293	177 aa		4.62	□□□□□ -1.67
BRCA1-229	ENST00000621897	IGLV5-52	A0A0A0MRZ9	124 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	PLEKHD1	A6NEE1	506 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	SMTNL1	A8MU46	457 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	BTBD18	B2RXH4	712 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	HBP1	O60381	514 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	KCNJ13	O60928	360 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	ADA	P00813	363 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	GPR12	P47775	334 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	MXI1	P50539	228 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	GAS1	P54826	345 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	ACTR2	P61160	394 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	SPATA3	Q8NHX4	192 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	TBC1D22A	Q8WUA7	517 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	SLC25A33	Q9BSK2	321 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	ZNF112	Q9UJU3	913 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	AGO1	Q9UL18	857 aa	Known RBP	4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	DNAJC16	Q9Y2G8	782 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897	CLDN16	Q9Y5I7	305 aa		4.61	□□□□□ -1.67
BRCA1-229	ENST00000621897		A0A096LPK6	155 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	TIMM23	O14925	209 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	SLC25A17	O43808	307 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	SERPINC1	P01008	464 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	CTPS1	P17812	591 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	ERVFC1-1	P60608	527 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	EEF1A2	Q05639	463 aa	Known RBP	4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	TRAF2	Q12933	501 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	COASY	Q13057	564 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	CAPS	Q13938	189 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	HLF	Q16534	295 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	CTXN3	Q4LDR2	81 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	PATL1	Q86TB9	770 aa	Known RBP	4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	FTSJ3	Q8IY81	847 aa	Known RBP	4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	GHDC	Q8N2G8	530 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	TMEM57	Q8N5G2	664 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	CEP70	Q8NHQ1	597 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	RTP4	Q96DX8	246 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	NPL	Q9BXD5	320 aa	Predicted RBP	4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	C1QTNF4	Q9BXJ3	329 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	ZNF556	Q9HAH1	456 aa		4.6	□□□□□ -1.67
BRCA1-229	ENST00000621897	hCG_1642624	A0A1W2PR95	340 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	DYTN	A2CJ06	578 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897		J3KR12	359 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	CHL1	O00533	1208 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	TNNT1	P13805	278 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	C21orf33	P30042	268 aa	Predicted RBP	4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	ARSF	P54793	590 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	FAM27E3	Q08E93	113 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	LPIN1	Q14693	890 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	PDCD2	Q16342	344 aa	Predicted RBP	4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	ANO1	Q5XXA6	986 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	DENND1B	Q6P3S1	775 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	H1FNT	Q75WM6	255 aa	Predicted RBP	4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	HERC6	Q8IVU3	1022 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	ANKRD44	Q8N8A2	993 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	MCPH1	Q8NEM0	835 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	SPPL3	Q8TCT6	385 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	TXNDC15	Q96J42	360 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	CLSTN3	Q9BQT9	956 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	LMAN2L	Q9H0V9	348 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	TTC12	Q9H892	705 aa	Predicted RBP	4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897	PTPRH	Q9HD43	1115 aa		4.59	□□□□□ -1.67
BRCA1-229	ENST00000621897		A0A087WYN8	130 aa		4.58	□□□□□ -1.68
BRCA1-229	ENST00000621897	PLSCR5	A0PG75	271 aa		4.58	□□□□□ -1.68

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