RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 ADNPQ9H2P0 1102 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 BLOC1S6Q9UL45 172 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 CDYLQ9Y232 598 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 TLL2Q9Y6L7 1015 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 FOCADQ5VW36 1801 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 BRCA2P51587 3418 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 A0A1W2PPW3 197 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 G3V2L1 256 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 MFSD11O43934 449 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 H6PDO95479 791 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 VTNP04004 478 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 IQCF3P0C7M6 154 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 HARS2P49590 506 aaKnown RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 SULT1E1P49888 294 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 RBP5P82980 135 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 MAP2K5Q13163 448 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 PLCL1Q15111 1095 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 PPP1R3AQ16821 1122 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 HSDL1Q3SXM5 330 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 TTC33Q6PID6 262 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 GPR141Q7Z602 305 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 PATL1Q86TB9 770 aaKnown RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 COPS5Q92905 334 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 SLC45A3Q96JT2 553 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 FRMD8Q9BZ67 464 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 ATXN3LQ9H3M9 355 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 TIMMDC1Q9NPL8 285 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 CHST12Q9NRB3 414 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 SETD4Q9NVD3 440 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 A0A0G2JLL6 359 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 KPNA6O60684 536 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 SNX2O60749 519 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 ENDOD1O94919 500 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 MYL4P12829 197 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF26P17031 533 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 ATICP31939 592 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 PPARGP37231 505 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 PSME3P61289 254 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 BNIP3Q12983 259 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 IKBKEQ14164 716 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 PRRT2Q7Z6L0 340 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 RBM12BQ8IXT5 1001 aaKnown RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 THEM5Q8N1Q8 247 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 ARRDC4Q8NCT1 418 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 RP9Q8TA86 221 aaKnown RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 PABPC5Q96DU9 382 aaKnown RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 KCTD15Q96SI1 283 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 NT5C1AQ9BXI3 368 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 NAA50Q9GZZ1 169 aaKnown RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 CDT1Q9H211 546 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 CXCL16Q9H2A7 254 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 OLA1Q9NTK5 396 aaKnown RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 MTMR10Q9NXD2 777 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 AFF4Q9UHB7 1163 aaKnown RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF214Q9UL59 606 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 SH3GLB1Q9Y371 365 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 RBMX2Q9Y388 322 aaKnown RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 SNX5Q9Y5X3 404 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 COPG1Q9Y678 874 aaKnown RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 BPTFQ12830 3046 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 SIPA1L1O43166 1804 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 A0A087WZ62 844 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 A0A0A0MRY4 1105 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 SPATA31C2B4DYI2 1134 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 PSMD12O00232 456 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 MATN2O00339 956 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 FAM189A1O60320 539 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 GCATO75600 419 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 IL18RAPO95256 599 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 VDRP11473 427 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 CCDC130P13994 396 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 PGAM1P18669 254 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 SP3Q02447 781 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 OCA2Q04671 838 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 GRM3Q14832 879 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 SOWAHAQ2M3V2 549 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 CELF3Q5SZQ8 465 aaKnown RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 MPZL3Q6UWV2 235 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 FRA10AC1Q70Z53 315 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 TTC30AQ86WT1 665 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 IPMKQ8NFU5 416 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 FNDC8Q8TC99 324 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 CANT1Q8WVQ1 401 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 ULK4Q96C45 1275 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 C12orf43Q96C57 262 aaKnown RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 SPATA17Q96L03 361 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 TEPSINQ96N21 525 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 SPATA13Q96N96 652 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 PCYT2Q99447 389 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 FDXACB1Q9BRP7 624 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF696Q9H7X3 374 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 PRDM5Q9NQX1 630 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 PPEF2O14830 753 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 LGALS2P05162 132 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 FAM163BP0C2L3 166 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 XPAP23025 273 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 GLDCP23378 1020 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 CNTFP26441 200 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 THPOP40225 353 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 RXRGP48443 463 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms