RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 KRT1P04264 644 aa13.08□□□□□ -0.32
CCL4-201ENST00000613947 SRCP12931 536 aa13.08□□□□□ -0.32
CCL4-201ENST00000613947 GABRG2P18507 467 aa13.08□□□□□ -0.32
CCL4-201ENST00000613947 CALRP27797 417 aaKnown RBP13.08□□□□□ -0.32
CCL4-201ENST00000613947 PAPOLAP51003 745 aaKnown RBP13.08□□□□□ -0.32
CCL4-201ENST00000613947 COPAP53621 1224 aa13.08□□□□□ -0.32
CCL4-201ENST00000613947 NRLP54845 237 aa13.08□□□□□ -0.32
CCL4-201ENST00000613947 CAMK2GQ13555 558 aaPredicted RBP13.08□□□□□ -0.32
CCL4-201ENST00000613947 SKIDA1Q1XH10 827 aa13.08□□□□□ -0.32
CCL4-201ENST00000613947 CEP85LQ5SZL2 805 aa13.08□□□□□ -0.32
CCL4-201ENST00000613947 C9orf64Q5T6V5 341 aa13.08□□□□□ -0.32
CCL4-201ENST00000613947 RETSATQ6NUM9 610 aa13.08□□□□□ -0.32
CCL4-201ENST00000613947 RASSF3Q86WH2 238 aa13.08□□□□□ -0.32
CCL4-201ENST00000613947 LZTR1Q8N653 840 aa13.08□□□□□ -0.32
CCL4-201ENST00000613947 PQLC3Q8N755 202 aa13.08□□□□□ -0.32
CCL4-201ENST00000613947 FAM126AQ9BYI3 521 aaPredicted RBP13.08□□□□□ -0.32
CCL4-201ENST00000613947 SLC40A1Q9NP59 571 aa13.08□□□□□ -0.32
CCL4-201ENST00000613947 DDX56Q9NY93 547 aaKnown RBP13.08□□□□□ -0.32
CCL4-201ENST00000613947 ABCA7Q8IZY2 2146 aa13.08□□□□□ -0.32
CCL4-201ENST00000613947 EDDM13A0A1B0GTR0 161 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 DFFAO00273 331 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 CES2O00748 559 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 HSPA9P38646 679 aaKnown RBP13.07□□□□□ -0.32
CCL4-201ENST00000613947 SERPINH1P50454 418 aaKnown RBP13.07□□□□□ -0.32
CCL4-201ENST00000613947 PTPN5P54829 565 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 SNCBQ16143 134 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 ODF2Q5BJF6 829 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 MFSD7Q6UXD7 560 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 ARHGAP36Q6ZRI8 547 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 NT5DC3Q86UY8 548 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 TMPRSS6Q8IU80 811 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 KATNAL2Q8IYT4 538 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 PGBD3Q8N328 593 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 MRGPRX1Q96LB2 322 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 RNF157Q96PX1 679 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 TPSD1Q9BZJ3 242 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 ZSCAN32Q9NX65 697 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 BCCIPQ9P287 314 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCL4-201ENST00000613947 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCL4-201ENST00000613947 PIEZO1Q92508 2521 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 CCDC163A0A0D9SF12 145 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 ARHGAP42A6NI28 874 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 J3KR12 359 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 AXIN1O15169 862 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 ZBTB24O43167 697 aaPredicted RBP13.07□□□□□ -0.32
CCL4-201ENST00000613947 ZNF821O75541 412 aaPredicted RBP13.07□□□□□ -0.32
CCL4-201ENST00000613947 FTCDO95954 541 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 NDUFV2P19404 249 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 CTNNA1P35221 906 aaKnown RBP13.07□□□□□ -0.32
CCL4-201ENST00000613947 LLGL1Q15334 1064 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 NCBP2-AS2Q69YL0 99 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 CCDC121Q6ZUS5 278 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 Q6ZVU0 165 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 PEX26Q7Z412 305 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 LONP2Q86WA8 852 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 VSIG1Q86XK7 387 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 CACUL1Q86Y37 369 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 PARP9Q8IXQ6 854 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 SYCE1Q8N0S2 351 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 ZBTB44Q8NCP5 570 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 OR2T3Q8NH03 318 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 SGSM3Q96HU1 749 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 TMBIM4Q9HC24 238 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 AMFRQ9UKV5 643 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 FCF1Q9Y324 198 aaKnown RBP13.07□□□□□ -0.32
CCL4-201ENST00000613947 PCDHA3Q9Y5H8 950 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 R4GN57 208 aa13.07□□□□□ -0.32
CCL4-201ENST00000613947 CXorf51AA0A1B0GTR3 108 aa13.06□□□□□ -0.32
CCL4-201ENST00000613947 ZSCAN5CA6NGD5 496 aaPredicted RBP13.06□□□□□ -0.32
CCL4-201ENST00000613947 ZNF487B1APH4 448 aa13.06□□□□□ -0.32
CCL4-201ENST00000613947 PPP1R12AO14974 1030 aaPredicted RBP13.06□□□□□ -0.32
CCL4-201ENST00000613947 BNIP3LO60238 219 aa13.06□□□□□ -0.32
CCL4-201ENST00000613947 EZRP15311 586 aaKnown RBP13.06□□□□□ -0.32
CCL4-201ENST00000613947 SERPINB6P35237 376 aa13.06□□□□□ -0.32
CCL4-201ENST00000613947 CDKN2BP42772 138 aa13.06□□□□□ -0.32
CCL4-201ENST00000613947 PEX5P50542 639 aa13.06□□□□□ -0.32
CCL4-201ENST00000613947 XRCC4Q13426 336 aa13.06□□□□□ -0.32
CCL4-201ENST00000613947 WDR5BQ86VZ2 330 aa13.06□□□□□ -0.32
CCL4-201ENST00000613947 ATOH1Q92858 354 aaPredicted RBP13.06□□□□□ -0.32
CCL4-201ENST00000613947 FAM129BQ96TA1 746 aa13.06□□□□□ -0.32
CCL4-201ENST00000613947 MAK16Q9BXY0 300 aaKnown RBP13.06□□□□□ -0.32
CCL4-201ENST00000613947 TNKS2Q9H2K2 1166 aa13.06□□□□□ -0.32
CCL4-201ENST00000613947 PRDM16Q9HAZ2 1276 aa13.06□□□□□ -0.32
CCL4-201ENST00000613947 IPO11Q9UI26 975 aaKnown RBP13.06□□□□□ -0.32
CCL4-201ENST00000613947 PACSIN2Q9UNF0 486 aaPredicted RBP13.06□□□□□ -0.32
CCL4-201ENST00000613947 PCDHGA2Q9Y5H1 932 aa13.06□□□□□ -0.32
CCL4-201ENST00000613947 NUMA1Q14980 2115 aa13.05□□□□□ -0.32
CCL4-201ENST00000613947 SPAG17Q6Q759 2223 aa13.05□□□□□ -0.32
CCL4-201ENST00000613947 CCDC189A1A4V9 331 aa13.05□□□□□ -0.32
CCL4-201ENST00000613947 GMNCA6NCL1 334 aa13.05□□□□□ -0.32
CCL4-201ENST00000613947 MFSD11O43934 449 aa13.05□□□□□ -0.32
CCL4-201ENST00000613947 PRAMEF11O60813 436 aa13.05□□□□□ -0.32
CCL4-201ENST00000613947 DNAJC8O75937 253 aaPredicted RBP13.05□□□□□ -0.32
CCL4-201ENST00000613947 MAP3K6O95382 1288 aa13.05□□□□□ -0.32
CCL4-201ENST00000613947 KRT10P13645 584 aa13.05□□□□□ -0.32
CCL4-201ENST00000613947 CTNNA2P26232 953 aa13.05□□□□□ -0.32
CCL4-201ENST00000613947 GEMIN4P57678 1058 aaKnown RBP13.05□□□□□ -0.32
CCL4-201ENST00000613947 GBE1Q04446 702 aa13.05□□□□□ -0.32
CCL4-201ENST00000613947 SLC10A2Q12908 348 aaPredicted RBP13.05□□□□□ -0.32
CCL4-201ENST00000613947 SRSF5Q13243 272 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms