RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 MYL6P60660 151 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 CTDSPL2Q05D32 466 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 AKIRIN2Q53H80 203 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 NEPROQ6NW34 567 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 PGAP1Q75T13 922 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 FBXL16Q8N461 479 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 NECTIN3Q9NQS3 549 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 HPF1Q9NWY4 346 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 NINJ2Q9NZG7 142 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 PPP4R1LQ9P1A2 415 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 SNX6Q9UNH7 406 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 HEY1Q9Y5J3 304 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 LOC102724428A0A0B4J2F2 783 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 ETS1P14921 441 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 CAPZA1P52907 286 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 CDH4P55283 916 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 SIK1P57059 783 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 PTK6Q13882 451 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 UBAP2LQ14157 1087 aaKnown RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 TGFBIQ15582 683 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 PLEKHG4Q58EX7 1191 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 GDPD1Q8N9F7 314 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 OR2T34Q8NGX1 318 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 OR2T3Q8NH03 318 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 LILRB1Q8NHL6 650 aaPredicted RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 PIWIL2Q8TC59 973 aaKnown RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 PURBQ96QR8 312 aaKnown RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 C1orf21Q9H246 121 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 A0A087X0T9 212 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 ERVV-1B6SEH8 477 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 OR3A3P47888 321 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 KLRC3Q07444 240 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 ALX1Q15699 326 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 IGSF11Q5DX21 431 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 CYP20A1Q6UW02 462 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 IPCEF1Q8WWN9 437 aaPredicted RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 CRELD1Q96HD1 420 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 MIPEPQ99797 713 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 MAD2L2Q9UI95 211 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 REXO2Q9Y3B8 237 aaKnown RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 KRBOX1C9JBD0 128 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 TBX1O43435 398 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 CSDE1O75534 798 aaKnown RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 UMPSP11172 480 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 DDX59Q5T1V6 619 aaKnown RBP eCLIP5□□□□□ -1.61
VPS13D-213ENST00000613099 SLC15A3Q8IY34 581 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 MFSD2AQ8NA29 543 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 OR51B5Q9H339 312 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 NTN4Q9HB63 628 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 TAS2R9Q9NYW1 312 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 NFKBIL1Q9UBC1 381 aaPredicted RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 RHPN2P1A8MT19 583 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 PIGNO95427 931 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 APRTP07741 180 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 FLI1Q01543 452 aaPredicted RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 AKAP4Q5JQC9 854 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 DPPA2Q7Z7J5 298 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 TDRPQ86YL5 185 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 UBE2J2Q8N2K1 259 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 SLCO1B3Q9NPD5 702 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 DNAJC28Q9NX36 388 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 COMMD9Q9P000 198 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 NCKAP1Q9Y2A7 1128 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 SCAMP1O15126 338 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 PSMD3O43242 534 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 HS6ST1O60243 411 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 ELP6Q0PNE2 266 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 PMF1Q6P1K2 205 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 DEF8Q6ZN54 512 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 KCNH7Q9NS40 1196 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 TESMINQ9Y4I5 508 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 TMEM2Q9UHN6 1383 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 ZNF99A8MXY4 864 aaPredicted RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 RASGRP1O95267 797 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 PGRP06401 933 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 ADRA1DP25100 572 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 KLK7P49862 253 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 HSD17B4P51659 736 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 LDLRAP1Q5SW96 308 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 SLITRK4Q8IW52 837 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 SLC44A2Q8IWA5 706 aaPredicted RBP5□□□□□ -1.61
VPS13D-213ENST00000613099 MIER2Q8N344 545 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 ITFG1Q8TB96 612 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 TOR3AQ9H497 397 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 SACM1LQ9NTJ5 587 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 NCKIPSDQ9NZQ3 722 aa5□□□□□ -1.61
VPS13D-213ENST00000613099 GLRA3O75311 464 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 MPOP05164 745 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 MYL9P24844 172 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 TLR1Q15399 786 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 VPS72Q15906 364 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 OR4C6Q8NH72 309 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 NSUN6Q8TEA1 469 aaKnown RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CTRCQ99895 268 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 ACTR2P61160 394 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 NFX1Q12986 1120 aaKnown RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 FAM83EQ2M2I3 478 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 BTBD16Q32M84 506 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 WDR72Q3MJ13 1102 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 N4BP2L1Q5TBK1 243 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms