RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 DEFB107AQ8IZN7 70 aa14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 SNX31Q8N9S9 440 aa14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 ELMO2Q96JJ3 720 aa14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 VAT1Q99536 393 aa14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 RHOJQ9H4E5 214 aa14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 SUDS3Q9H7L9 328 aaPredicted RBP14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 OXSMQ9NWU1 459 aa14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 STOML1Q9UBI4 398 aa14.27□□□□□ -0.13
PCDHGA3-202ENST00000612467 DLX3O60479 287 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 MPOP05164 745 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 VHLP40337 213 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 CD86P42081 329 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 COPAP53621 1224 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 TSTD2Q5T7W7 516 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 EPGNQ6UW88 154 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 RNF111Q6ZNA4 994 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 ZNF598Q86UK7 904 aaKnown RBP14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 MAB21L3Q8N8X9 362 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 SH3TC2Q8TF17 1288 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 LENG8Q96PV6 779 aaPredicted RBP14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 FCRL5Q96RD9 977 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 CRISPLD1Q9H336 500 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 DNAJC28Q9NX36 388 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 FAM155AB1AL88 458 aaPredicted RBP14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 NT5C1B-RDH14C9J2C7 533 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 MAP3K13O43283 966 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 PIRTP0C851 137 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 HNRNPLP14866 589 aaKnown RBP eCLIP14.26□□□□□ -0.134e-10■■■■■ 68.5
PCDHGA3-202ENST00000612467 ITGAXP20702 1163 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 ADRA1AP35348 466 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 WNT3AP56704 352 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 LSMEM2Q8N112 164 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 IGSF8Q969P0 613 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 PSMG2Q969U7 264 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 MIEF2Q96C03 454 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 TSGA13Q96PP4 275 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 MMADHCQ9H3L0 296 aaPredicted RBP14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 TCAF1Q9Y4C2 921 aa14.26□□□□□ -0.13
PCDHGA3-202ENST00000612467 CACNG3O60359 315 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 ANPEPP15144 967 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 TSPAN8P19075 237 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 ATP6V1C1P21283 382 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 KCNA5P22460 613 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 CSE1LP55060 971 aaKnown RBP14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 RAP1GAP2Q684P5 730 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 PTAR1Q7Z6K3 402 aaPredicted RBP14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 RNF148Q8N7C7 305 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 CATSPER2Q96P56 530 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 HAPLN3Q96S86 360 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 OLFM1Q99784 485 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 UPF3AQ9H1J1 476 aaKnown RBP14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 TNFRSF12AQ9NP84 129 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 RNF186Q9NXI6 227 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 PCDH10Q9P2E7 1040 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 STX18Q9P2W9 335 aaKnown RBP14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 AAR2Q9Y312 384 aaKnown RBP14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 MAGEB16A2A368 324 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 TMEM88BA6NKF7 163 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 KCNU1A8MYU2 1149 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 AIM2O14862 343 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 KPNA6O60684 536 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 CIB2O75838 187 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 PEX11BO96011 259 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 SLC10A3P09131 477 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 ACTR3P61158 418 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 COG7P83436 770 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 KLF10Q13118 480 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 CSHL1Q14406 222 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 TRIM71Q2Q1W2 868 aaKnown RBP14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 LSM12Q3MHD2 195 aaKnown RBP14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 NXNQ6DKJ4 435 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 LRRC8EQ6NSJ5 796 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 TMC7Q7Z402 723 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 RTL3Q8N8U3 475 aaKnown RBP14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 PPHLN1Q8NEY8 458 aaKnown RBP14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 CATSPERBQ9H7T0 1116 aa14.25□□□□□ -0.13
PCDHGA3-202ENST00000612467 GRID2O43424 1007 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 LMNAP02545 664 aaKnown RBP14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 ALOX15P16050 662 aaPredicted RBP14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 CSRP3P50461 194 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 ARSDP51689 593 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 CCSAPQ6IQ19 270 aaPredicted RBP14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 LINC00523Q86TU6 105 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 HEXDCQ8WVB3 486 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 GPR78Q96P69 363 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 TCF7L2Q9NQB0 619 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 RPL26L1Q9UNX3 145 aaKnown RBP14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 MT-CO1P00395 513 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 COX4I1P13073 169 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 HDCP19113 662 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 RAB27AP51159 221 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 MLLT6P55198 1093 aaPredicted RBP14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 CDK18Q07002 472 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 DNAL1Q4LDG9 190 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 MS4A13Q5J8X5 152 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 RSPO2Q6UXX9 243 aaPredicted RBP14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 RANBP10Q6VN20 620 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 ZYG11AQ6WRX3 759 aa14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 NET1Q7Z628 596 aaPredicted RBP14.24□□□□□ -0.13
PCDHGA3-202ENST00000612467 CFAP52Q8N1V2 620 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms