RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 DNAJC28Q9NX36 388 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 RNF112Q9ULX5 631 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 BTRCQ9Y297 605 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 ORC6Q9Y5N6 252 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 LAMB1P07942 1786 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 MYOCOSA0A1B0GUC4 107 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 SYCE1LA8MT33 242 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 HNRNPRO43390 633 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 DAB1O75553 588 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 TIPRLO75663 272 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 AOC1P19801 751 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 ATP5F1P24539 256 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 CD86P42081 329 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 LILRA4P59901 499 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 TWF1Q12792 350 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 CAPRIN1Q14444 709 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 NEDD8Q15843 81 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 ARMC3Q5W041 872 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 CLEC6AQ6EIG7 209 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 OVOS1Q6IE37 1185 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 PLEKHH3Q7Z736 793 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 TLK2Q86UE8 772 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 FAM35AQ86V20 835 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 GPC2Q8N158 579 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 DNAJB14Q8TBM8 379 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 CCDC126Q96EE4 140 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 SMARCD1Q96GM5 515 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 FAR2Q96K12 515 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 VAT1Q99536 393 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 GORASP1Q9BQQ3 440 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 TRIM62Q9BVG3 475 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 FTHL17Q9BXU8 183 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 C20orf27Q9GZN8 174 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 NOL11Q9H8H0 719 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 C6orf203Q9P0P8 240 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 FZD10Q9ULW2 581 aa6.95□□□□□ -1.3
SYNPO2-206ENST00000610556 TMEM114B3SHH9 223 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 RNASEH1O60930 286 aaKnown RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 TADA2AO75478 443 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 MT-ND1P03886 318 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 HSPA1AP0DMV8 641 aaKnown RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 HSPA1BP0DMV9 641 aaKnown RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 HMOX2P30519 316 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 RGS2P41220 211 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 BRCC3P46736 316 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 TAS2R39P59534 338 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 C16orf72Q14CZ0 275 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 TAF1CQ15572 869 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 CYP51A1Q16850 503 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 TRNP1Q6NT89 227 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 MRNIPQ6NTE8 343 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 PIWIL4Q7Z3Z4 852 aaKnown RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 TSPAN14Q8NG11 270 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 GIPC2Q8TF65 315 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 WDR83Q9BRX9 315 aaKnown RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 APOL5Q9BWW9 433 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 RHOBTB2Q9BYZ6 727 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 R3HDMLQ9H3Y0 253 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 PNPLA8Q9NP80 782 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 SEMA4BQ9NPR2 832 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 EURLQ9NYK6 297 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 ANKRD6Q9Y2G4 727 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 A0A088AWK7 358 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 FAM149AA5PLN7 773 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 CLOCKO15516 846 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 TREHO43280 583 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 MAP3K13O43283 966 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 OR6B1O95007 311 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 ALBP02768 609 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 SNRPB2P08579 225 aaKnown RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 DHRS4L1P0CG22 281 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 DARSP14868 501 aaKnown RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 WNT3AP56704 352 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 POU4F1Q01851 419 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 SAMD4BQ5PRF9 694 aaKnown RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 ANGPTL8Q6UXH0 198 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 DNAJC14Q6Y2X3 702 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 B3GNT6Q6ZMB0 384 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 KBTBD2Q8IY47 623 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 C2orf69Q8N8R5 385 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 TRPC4APQ8TEL6 797 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 HDAC10Q969S8 669 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 FCRL2Q96LA5 508 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 SLC25A23Q9BV35 468 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 THUMPD3Q9BV44 507 aaKnown RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 CCDC106Q9BWC9 280 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 PRPF19Q9UMS4 504 aaKnown RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 MYRFQ9Y2G1 1151 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 NDUFAF1Q9Y375 327 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 IPPQ9Y573 584 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 SNX5Q9Y5X3 404 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 COMMD3-BMI1R4GMX3 469 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 QSER1Q2KHR3 1735 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 SLC12A8A0AV02 714 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 TRIM38O00635 465 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 SCAMP3O14828 347 aaKnown RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 ZNF189O75820 626 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 GLP2RO95838 553 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms