RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, human

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPE-208	ENST00000598969	SRC	P12931	536 aa		21.22	■□□□□ 0.99
COPE-208	ENST00000598969	MAGEA6	P43360	314 aa		21.22	■□□□□ 0.99
COPE-208	ENST00000598969	RGR	P47804	291 aa		21.22	■□□□□ 0.99
COPE-208	ENST00000598969	ALG1L	Q6GMV1	187 aa		21.22	■□□□□ 0.99
COPE-208	ENST00000598969	CENPU	Q71F23	418 aa		21.22	■□□□□ 0.99
COPE-208	ENST00000598969	ADHFE1	Q8IWW8	467 aa		21.22	■□□□□ 0.99
COPE-208	ENST00000598969	KLHDC8B	Q8IXV7	354 aa		21.22	■□□□□ 0.99
COPE-208	ENST00000598969	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	21.22	■□□□□ 0.99
COPE-208	ENST00000598969	ARRDC2	Q8TBH0	407 aa		21.22	■□□□□ 0.99
COPE-208	ENST00000598969	CYB5D2	Q8WUJ1	264 aa		21.22	■□□□□ 0.99
COPE-208	ENST00000598969	DNASE1L2	Q92874	299 aa		21.22	■□□□□ 0.99
COPE-208	ENST00000598969	OXNAD1	Q96HP4	312 aa	Predicted RBP	21.22	■□□□□ 0.99
COPE-208	ENST00000598969	PKNOX2	Q96KN3	472 aa		21.22	■□□□□ 0.99
COPE-208	ENST00000598969	RBM15	Q96T37	977 aa	Known RBP eCLIP	21.22	■□□□□ 0.99
COPE-208	ENST00000598969	MLPH	Q9BV36	600 aa	Predicted RBP	21.22	■□□□□ 0.99
COPE-208	ENST00000598969	CIPC	Q9C0C6	399 aa		21.22	■□□□□ 0.99
COPE-208	ENST00000598969	SEMA4A	Q9H3S1	761 aa		21.22	■□□□□ 0.99
COPE-208	ENST00000598969	FBRSL1	Q9HCM7	1045 aa	Known RBP	21.22	■□□□□ 0.99
COPE-208	ENST00000598969	ELOVL2	Q9NXB9	296 aa		21.22	■□□□□ 0.99
COPE-208	ENST00000598969	ERVW-1	Q9UQF0	538 aa		21.22	■□□□□ 0.99
COPE-208	ENST00000598969	TTC24	A2A3L6	582 aa	Predicted RBP	21.21	■□□□□ 0.99
COPE-208	ENST00000598969	AGPS	O00116	658 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	ZNF821	O75541	412 aa	Predicted RBP	21.21	■□□□□ 0.99
COPE-208	ENST00000598969	GJB3	O75712	270 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	EIF3B	P55884	814 aa	Known RBP	21.21	■□□□□ 0.99
COPE-208	ENST00000598969	DSC2	Q02487	901 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	ZP2	Q05996	745 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	IHH	Q14623	411 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	SYCP2L	Q5T4T6	812 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	IER5L	Q5T953	404 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	TXNDC11	Q6PKC3	985 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	PPP1R21	Q6ZMI0	780 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	BBS5	Q8N3I7	341 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	SH2D3C	Q8N5H7	860 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	ATP11C	Q8NB49	1132 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	SPATA22	Q8NHS9	363 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	PHACTR1	Q9C0D0	580 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	SLC25A51	Q9H1U9	297 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	SLCO3A1	Q9UIG8	710 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	SLC25A13	Q9UJS0	675 aa		21.21	■□□□□ 0.99
COPE-208	ENST00000598969	SPECC1L-ADORA2A	F8WAN1	911 aa		21.2	■□□□□ 0.99
COPE-208	ENST00000598969	TMEM63A	O94886	807 aa		21.2	■□□□□ 0.99
COPE-208	ENST00000598969	KAT7	O95251	611 aa		21.2	■□□□□ 0.99
COPE-208	ENST00000598969	MMP2	P08253	660 aa		21.2	■□□□□ 0.99
COPE-208	ENST00000598969	CR2	P20023	1033 aa		21.2	■□□□□ 0.99
COPE-208	ENST00000598969	CTH	P32929	405 aa		21.2	■□□□□ 0.99
COPE-208	ENST00000598969	ARL4C	P56559	192 aa		21.2	■□□□□ 0.99
COPE-208	ENST00000598969	ITK	Q08881	620 aa		21.2	■□□□□ 0.99
COPE-208	ENST00000598969	TDG	Q13569	410 aa		21.2	■□□□□ 0.99
COPE-208	ENST00000598969	HIF1A	Q16665	826 aa		21.2	■□□□□ 0.99
COPE-208	ENST00000598969	PTPRN	Q16849	979 aa		21.2	■□□□□ 0.99
COPE-208	ENST00000598969	PRPF39	Q86UA1	669 aa	Known RBP	21.2	■□□□□ 0.99
COPE-208	ENST00000598969	IMP4	Q96G21	291 aa	Known RBP	21.2	■□□□□ 0.99
COPE-208	ENST00000598969	MYO19	Q96H55	970 aa		21.2	■□□□□ 0.99
COPE-208	ENST00000598969	EXOC2	Q96KP1	924 aa		21.2	■□□□□ 0.99
COPE-208	ENST00000598969	FRMD8	Q9BZ67	464 aa	Predicted RBP	21.2	■□□□□ 0.99
COPE-208	ENST00000598969	POLR1E	Q9GZS1	481 aa	Known RBP	21.2	■□□□□ 0.99
COPE-208	ENST00000598969	CDC42EP4	Q9H3Q1	356 aa	Known RBP	21.2	■□□□□ 0.99
COPE-208	ENST00000598969	HEBP1	Q9NRV9	189 aa		21.2	■□□□□ 0.99
COPE-208	ENST00000598969	PRKAG3	Q9UGI9	489 aa		21.2	■□□□□ 0.99
COPE-208	ENST00000598969	GOLGA6L10	A6NI86	522 aa		21.2	■□□□□ 0.98
COPE-208	ENST00000598969	MT-CYB	P00156	380 aa	Predicted RBP	21.2	■□□□□ 0.98
COPE-208	ENST00000598969	ASL	P04424	464 aa		21.2	■□□□□ 0.98
COPE-208	ENST00000598969	DLD	P09622	509 aa	Known RBP	21.2	■□□□□ 0.98
COPE-208	ENST00000598969	GALK1	P51570	392 aa		21.2	■□□□□ 0.98
COPE-208	ENST00000598969	IFFO1	Q0D2I5	559 aa		21.2	■□□□□ 0.98
COPE-208	ENST00000598969	DGKK	Q5KSL6	1271 aa		21.2	■□□□□ 0.98
COPE-208	ENST00000598969	PDCD7	Q8N8D1	485 aa	Known RBP	21.2	■□□□□ 0.98
COPE-208	ENST00000598969	EXOC4	Q96A65	974 aa		21.2	■□□□□ 0.98
COPE-208	ENST00000598969	TADA1	Q96BN2	335 aa		21.2	■□□□□ 0.98
COPE-208	ENST00000598969	NSMCE3	Q96MG7	304 aa		21.2	■□□□□ 0.98
COPE-208	ENST00000598969	SEMA3C	Q99985	751 aa		21.2	■□□□□ 0.98
COPE-208	ENST00000598969	UBP1	Q9NZI7	540 aa		21.2	■□□□□ 0.98
COPE-208	ENST00000598969	TBC1D3B	A6NDS4	549 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	RIPK2	O43353	540 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	ATP5B	P06576	529 aa	Known RBP	21.19	■□□□□ 0.98
COPE-208	ENST00000598969	APRT	P07741	180 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	NUDT17	P0C025	328 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	SRF	P11831	508 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	GRIA2	P42262	883 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	VASP	P50552	380 aa	Predicted RBP	21.19	■□□□□ 0.98
COPE-208	ENST00000598969	RHOA	P61586	193 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	SLC29A2	Q14542	456 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	EIF4H	Q15056	248 aa	Known RBP	21.19	■□□□□ 0.98
COPE-208	ENST00000598969	KCTD11	Q693B1	232 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	METTL3	Q86U44	580 aa	Known RBP	21.19	■□□□□ 0.98
COPE-208	ENST00000598969	RNF135	Q8IUD6	432 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	PDIK1L	Q8N165	341 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	PWWP2A	Q96N64	755 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	P2RY13	Q9BPV8	354 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	SLC2A4RG	Q9NR83	387 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	HCN2	Q9UL51	889 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	PIAS3	Q9Y6X2	628 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	COL6A3	P12111	3177 aa		21.19	■□□□□ 0.98
COPE-208	ENST00000598969	ANTXRL	A6NF34	631 aa		21.18	■□□□□ 0.98
COPE-208	ENST00000598969		E7EVH7	732 aa		21.18	■□□□□ 0.98
COPE-208	ENST00000598969	GOLGA8M	H3BSY2	632 aa		21.18	■□□□□ 0.98
COPE-208	ENST00000598969	EIF3H	O15372	352 aa	Known RBP eCLIP	21.18	■□□□□ 0.98
COPE-208	ENST00000598969	TIMM44	O43615	452 aa		21.18	■□□□□ 0.98
COPE-208	ENST00000598969	TTC4	O95801	387 aa		21.18	■□□□□ 0.98

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