RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 NEMP1O14524 444 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 YY2O15391 372 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 TSPAN6O43657 245 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 CALCAP01258 141 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 RPLP0P05388 317 aaKnown RBP10.32□□□□□ -0.76
TRIM28-210ENST00000597618 GLI1P08151 1106 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 HGFP14210 728 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 TSHRP16473 764 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 CD82P27701 267 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 L1CAMP32004 1257 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 FKBP3Q00688 224 aaKnown RBP10.32□□□□□ -0.76
TRIM28-210ENST00000597618 CETN1Q12798 172 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 MORC3Q14149 939 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 CLCA4Q14CN2 919 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 ELOCQ15369 112 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 C5orf22Q49AR2 442 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 DENND1BQ6P3S1 775 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 LINGO4Q6UY18 593 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 PARS2Q7L3T8 475 aaKnown RBP10.32□□□□□ -0.76
TRIM28-210ENST00000597618 TMEM110Q86TL2 294 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 SETD3Q86TU7 594 aaPredicted RBP10.32□□□□□ -0.76
TRIM28-210ENST00000597618 SMYD4Q8IYR2 804 aaPredicted RBP10.32□□□□□ -0.76
TRIM28-210ENST00000597618 SDR16C5Q8N3Y7 309 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 FSTL5Q8N475 847 aaPredicted RBP10.32□□□□□ -0.76
TRIM28-210ENST00000597618 KYQ8NBH2 561 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 OR6C4Q8NGE1 309 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 KAT5Q92993 513 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 RAB7BQ96AH8 199 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 SLC2A13Q96QE2 648 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 FUCA2Q9BTY2 467 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 CPEB1Q9BZB8 566 aaKnown RBP10.32□□□□□ -0.76
TRIM28-210ENST00000597618 FOXP3Q9BZS1 431 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 CEP44Q9C0F1 390 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 EPN3Q9H201 632 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 METTL14Q9HCE5 456 aaKnown RBP10.32□□□□□ -0.76
TRIM28-210ENST00000597618 GULP1Q9UBP9 304 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 DOLKQ9UPQ8 538 aa10.32□□□□□ -0.76
TRIM28-210ENST00000597618 UTP20O75691 2785 aaKnown RBP10.31□□□□□ -0.76
TRIM28-210ENST00000597618 TRPM6Q9BX84 2022 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 PRAMEF33A0A0G2JMD5 474 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 A0A1W2PQ27 194 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 A0A1W2PQ64 194 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 A0A1W2PQC6 194 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 CLEC18AA5D8T8 446 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 TOR1BO14657 336 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 PMM2O15305 246 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 MED7O43513 233 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 PRAMEF10O60809 474 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 HSF2BPO75031 334 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 PAGE1O75459 146 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 CNTN5O94779 1100 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 ENDOD1O94919 500 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 ALPIP09923 528 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 GGCXP38435 758 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 FMO5P49326 533 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 SERPINH1P50454 418 aaKnown RBP10.31□□□□□ -0.76
TRIM28-210ENST00000597618 BLKP51451 505 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 YPEL5P62699 121 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 CYP4F2P78329 520 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 CCL7P80098 99 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 FOXK1P85037 733 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 GCNT1Q02742 428 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 PPARDQ03181 441 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 DNM1Q05193 864 aaKnown RBP10.31□□□□□ -0.76
TRIM28-210ENST00000597618 C1QBPQ07021 282 aaKnown RBP10.31□□□□□ -0.76
TRIM28-210ENST00000597618 PDCLQ13371 301 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 TAF5Q15542 800 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 FAXCQ5TGI0 409 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 RETSATQ6NUM9 610 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 LVRNQ6Q4G3 990 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 CLEC18BQ6UXF7 455 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 MACC1Q6ZN28 852 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 DEFB106AQ8N104 65 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 PCDH20Q8N6Y1 951 aaKnown RBP10.31□□□□□ -0.76
TRIM28-210ENST00000597618 CLEC18CQ8NCF0 446 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 PCDH19Q8TAB3 1148 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 HTR3CQ8WXA8 447 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 ARHGEF26Q96DR7 871 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 HEPHQ9BQS7 1158 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 CLPBQ9H078 707 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 ASNSD1Q9NWL6 643 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 RABGEF1Q9UJ41 708 aa10.31□□□□□ -0.76
TRIM28-210ENST00000597618 A0A0D9SEW6 157 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 FAM237AA0A1B0GTK4 181 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 A0A1W2PQM1 296 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 ZNF821O75541 412 aaPredicted RBP10.3□□□□□ -0.76
TRIM28-210ENST00000597618 ADCY5O95622 1261 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 KRT5P13647 590 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 WT1P19544 449 aaPredicted RBP10.3□□□□□ -0.76
TRIM28-210ENST00000597618 IGFALSP35858 605 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 CASRP41180 1078 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 DNA2P51530 1060 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 CCNHP51946 323 aaPredicted RBP10.3□□□□□ -0.76
TRIM28-210ENST00000597618 NDUFA8P51970 172 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 NME3Q13232 169 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 KCNAB2Q13303 367 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 ALFQ53S48 1182 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 EFHC1Q5JVL4 640 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 BORAQ6PGQ7 559 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 ZNF783Q6ZMS7 281 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms