RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 GVINP1Q7Z2Y8 2422 aa15.55■□□□□ 0.08
TRIM47-206ENST00000592942 DMXL1Q9Y485 3027 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 ATXN2Q99700 1313 aaKnown RBP15.54■□□□□ 0.08
TRIM47-206ENST00000592942 LRRD1A4D1F6 860 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 GRID2IPA4D2P6 1211 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 KPNA3O00505 521 aaPredicted RBP15.54■□□□□ 0.08
TRIM47-206ENST00000592942 PLRG1O43660 514 aaKnown RBP15.54■□□□□ 0.08
TRIM47-206ENST00000592942 SPOPO43791 374 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 PALMO75781 387 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 IPO7O95373 1038 aaKnown RBP15.54■□□□□ 0.08
TRIM47-206ENST00000592942 TNNT1P13805 278 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 PI4KAP42356 2102 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 MARCKSL1P49006 195 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 IRX4P78413 519 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 GBE1Q04446 702 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 GALNT2Q10471 571 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 SFSWAPQ12872 951 aaKnown RBP15.54■□□□□ 0.08
TRIM47-206ENST00000592942 SLC9A4Q6AI14 798 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 MFSD7Q6UXD7 560 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 PRR23CQ6ZRP0 262 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 GPR161Q8N6U8 529 aaKnown RBP15.54■□□□□ 0.08
TRIM47-206ENST00000592942 PLD5Q8N7P1 536 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 OR2T34Q8NGX1 318 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 OR14C36Q8NHC7 312 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 KRT35Q92764 455 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 LRIG1Q96JA1 1093 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 HDAC8Q9BY41 377 aa15.54■□□□□ 0.08
TRIM47-206ENST00000592942 DDX56Q9NY93 547 aaKnown RBP15.54■□□□□ 0.08
TRIM47-206ENST00000592942 GOLGA6L6A8MZA4 724 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 KRIT1O00522 736 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 SLC7A4O43246 635 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 PSTPIP1O43586 416 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 GDF9O60383 454 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 GJB3O75712 270 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 MAP3K6O95382 1288 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 ITGB7P26010 798 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 SERPINB6P35237 376 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 GARSP41250 739 aaKnown RBP15.53■□□□□ 0.08
TRIM47-206ENST00000592942 CDKN2BP42772 138 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 ID4P47928 161 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 CSNK1DP48730 415 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 RHOAP61586 193 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 CCZ1BP86790 482 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 CCZ1P86791 482 aaPredicted RBP15.53■□□□□ 0.08
TRIM47-206ENST00000592942 ADCY2Q08462 1091 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 NSUN2Q08J23 767 aaKnown RBP eCLIP15.53■□□□□ 0.08
TRIM47-206ENST00000592942 RFTN1Q14699 578 aaPredicted RBP15.53■□□□□ 0.08
TRIM47-206ENST00000592942 SYCP2LQ5T4T6 812 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 KIAA0895LQ68EN5 471 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 SLC23A3Q6PIS1 610 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 ERN2Q76MJ5 926 aaKnown RBP15.53■□□□□ 0.08
TRIM47-206ENST00000592942 DAAM2Q86T65 1068 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 KIAA1328Q86T90 577 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 LRRC49Q8IUZ0 686 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 PGBD5Q8N414 524 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 LRRN4Q8WUT4 740 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 EXOC2Q96KP1 924 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 CALR3Q96L12 384 aaKnown RBP15.53■□□□□ 0.08
TRIM47-206ENST00000592942 GDAP1L1Q96MZ0 367 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 ZNF599Q96NL3 588 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 TSGA13Q96PP4 275 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 PSKH2Q96QS6 385 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 CPEB1Q9BZB8 566 aaKnown RBP15.53■□□□□ 0.08
TRIM47-206ENST00000592942 KDM4CQ9H3R0 1056 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 ZDHHC6Q9H6R6 413 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 SP110Q9HB58 689 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 CAPN10Q9HC96 672 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 DTLQ9NZJ0 730 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 EIF2B4Q9UI10 523 aaKnown RBP15.53■□□□□ 0.08
TRIM47-206ENST00000592942 DOCK9Q9BZ29 2069 aa15.53■□□□□ 0.08
TRIM47-206ENST00000592942 FAM47DPA6NHR8 397 aa15.52■□□□□ 0.08
TRIM47-206ENST00000592942 ARHGAP6O43182 974 aa15.52■□□□□ 0.08
TRIM47-206ENST00000592942 KRT1P04264 644 aa15.52■□□□□ 0.08
TRIM47-206ENST00000592942 CR2P20023 1033 aa15.52■□□□□ 0.08
TRIM47-206ENST00000592942 HOXD12P35452 270 aa15.52■□□□□ 0.08
TRIM47-206ENST00000592942 PEX5P50542 639 aa15.52■□□□□ 0.08
TRIM47-206ENST00000592942 LBRQ14739 615 aaKnown RBP15.52■□□□□ 0.08
TRIM47-206ENST00000592942 ZNF805Q5CZA5 627 aa15.52■□□□□ 0.08
TRIM47-206ENST00000592942 WDR45BQ5MNZ6 344 aa15.52■□□□□ 0.08
TRIM47-206ENST00000592942 ZFYVE27Q5T4F4 411 aa15.52■□□□□ 0.08
TRIM47-206ENST00000592942 GDPD4Q6W3E5 623 aa15.52■□□□□ 0.08
TRIM47-206ENST00000592942 KATNAL2Q8IYT4 538 aa15.52■□□□□ 0.08
TRIM47-206ENST00000592942 RGL4Q8IZJ4 473 aa15.52■□□□□ 0.08
TRIM47-206ENST00000592942 RYBPQ8N488 228 aaPredicted RBP15.52■□□□□ 0.08
TRIM47-206ENST00000592942 TEX26Q8N6G2 289 aa15.52■□□□□ 0.08
TRIM47-206ENST00000592942 KLHL32Q96NJ5 620 aa15.52■□□□□ 0.08
TRIM47-206ENST00000592942 PCDHA3Q9Y5H8 950 aa15.52■□□□□ 0.08
TRIM47-206ENST00000592942 CACNA1AO00555 2505 aa15.52■□□□□ 0.07
TRIM47-206ENST00000592942 TBC1D3DA0A087WVF3 549 aa15.51■□□□□ 0.07
TRIM47-206ENST00000592942 TBC1D3IA0A087WXS9 549 aa15.51■□□□□ 0.07
TRIM47-206ENST00000592942 TBC1D3EA0A087X179 549 aa15.51■□□□□ 0.07
TRIM47-206ENST00000592942 TBC1D3KA0A087X1G2 549 aa15.51■□□□□ 0.07
TRIM47-206ENST00000592942 TTC24A2A3L6 582 aaPredicted RBP15.51■□□□□ 0.07
TRIM47-206ENST00000592942 TBC1D3FA6NER0 549 aaPredicted RBP15.51■□□□□ 0.07
TRIM47-206ENST00000592942 LRRC72A6NJI9 287 aa15.51■□□□□ 0.07
TRIM47-206ENST00000592942 C16orf96A6NNT2 1141 aa15.51■□□□□ 0.07
TRIM47-206ENST00000592942 TBC1D3LB9A6J9 549 aa15.51■□□□□ 0.07
TRIM47-206ENST00000592942 WNT9AO14904 365 aa15.51■□□□□ 0.07
TRIM47-206ENST00000592942 KHNYNO15037 678 aaKnown RBP15.51■□□□□ 0.07
TRIM47-206ENST00000592942 SPINT1O43278 529 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms