RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 WNT3AP56704 352 aa16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 ACTR3P61158 418 aa16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 SLC25A3Q00325 362 aa16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 CNGA3Q16281 694 aa16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 SLC9B1Q4ZJI4 515 aa16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 METTL21CQ5VZV1 264 aa16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 TRIM68Q6AZZ1 485 aa16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 RTN4RL1Q86UN2 441 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 UMODL1-AS1Q8N2C9 162 aa16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 C2CD4AQ8NCU7 369 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 STYXQ8WUJ0 223 aa16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 ELMO2Q96JJ3 720 aa16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 ZNF333Q96JL9 665 aa16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 FAM193BQ96PV7 902 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 GMIPQ9P107 970 aa16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 PRG3Q9Y2Y8 225 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 PCDHB5Q9Y5E4 795 aa16.78■□□□□ 0.28
PRKCSH-217ENST00000592741 MPSTP25325 297 aa16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 RENBPP51606 427 aa16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 ASPHQ12797 758 aa16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 HNRNPDQ14103 355 aaKnown RBP16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 PCSK7Q16549 785 aa16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 ZNF470Q6ECI4 717 aa16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 KDELC1Q6UW63 502 aa16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 KDELC2Q7Z4H8 507 aa16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 RNF180Q86T96 592 aa16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 LMNTD2Q8IXW0 634 aa16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 CENPLQ8N0S6 344 aaPredicted RBP16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 TMEM151AQ8N4L1 468 aa16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 PPFIBP2Q8ND30 876 aa16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 FATE1Q969F0 183 aa16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 FTHL17Q9BXU8 183 aa16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 ZYG11BQ9C0D3 744 aa16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 ATXN3LQ9H3M9 355 aa16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 NOL6Q9H6R4 1146 aaKnown RBP16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 GPAMQ9HCL2 828 aa16.77■□□□□ 0.28
PRKCSH-217ENST00000592741 CASP8AP2Q9UKL3 1982 aa16.77■□□□□ 0.27
PRKCSH-217ENST00000592741 A0A087X1B8 175 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 A0A088AWK7 358 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 E9PBE3 544 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 KLHL41O60662 606 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 SBK3P0C264 359 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 ELNP15502 786 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 CHRNA4P43681 627 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 RPL14P50914 215 aaKnown RBP16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 KPNA2P52292 529 aaKnown RBP16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 PRKAA1Q13131 559 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 SEL1L3Q68CR1 1132 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 TFAP2DQ7Z6R9 452 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 MYLK4Q86YV6 388 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 FSTL5Q8N475 847 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 ATP6V0D2Q8N8Y2 350 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 GABPB2Q8TAK5 448 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 AGR3Q8TD06 166 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 NRG4Q8WWG1 115 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 LBHD1Q9BQE6 289 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 NT5MQ9NPB1 228 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 TCF7L2Q9NQB0 619 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 PRDM5Q9NQX1 630 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 MAN1C1Q9NR34 630 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 TMEM248Q9NWD8 314 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 GEMIN8Q9NWZ8 242 aaKnown RBP16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 XPR1Q9UBH6 696 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 TLL2Q9Y6L7 1015 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 HEATR9A2RTY3 570 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 LIN7AO14910 233 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 SYN3O14994 580 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 HDAC3O15379 428 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 DCXO43602 365 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 TADA2AO75478 443 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 CHRNGP07510 517 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 GRK4P32298 578 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 MAGEA11P43364 429 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 PGGT1BP53609 377 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 SLC12A2P55011 1212 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 AP2B1P63010 937 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 EFEMP1Q12805 493 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 ZNF460Q14592 562 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 MS4A13Q5J8X5 152 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 VARS2Q5ST30 1063 aaKnown RBP16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 TMC7Q7Z402 723 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 CEP97Q8IW35 865 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 MFSD6LQ8IWD5 586 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 ZNF683Q8IZ20 524 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 SLC25A41Q8N5S1 370 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 MAPK15Q8TD08 544 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 LINC01599Q8WXQ3 324 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 HMCESQ96FZ2 354 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 ZIC5Q96T25 663 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 SP110Q9HB58 689 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 FBXO5Q9UKT4 447 aa16.76■□□□□ 0.27
PRKCSH-217ENST00000592741 THSD7BQ9C0I4 1608 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 TMEM88BA6NKF7 163 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 MATN2O00339 956 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 PIGNO95427 931 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 PEX11BO96011 259 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 COX4I1P13073 169 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 ACLYP53396 1101 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 USP46P62068 366 aa16.75■□□□□ 0.27
PRKCSH-217ENST00000592741 POU4F1Q01851 419 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms