RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 LRRC10BA6NIK2 292 aa18.32■□□□□ 0.52
H3F3B-209ENST00000589949 FFAR2O15552 330 aa18.32■□□□□ 0.52
H3F3B-209ENST00000589949 NSFP46459 744 aaKnown RBP18.32■□□□□ 0.52
H3F3B-209ENST00000589949 RPL7AP62424 266 aaKnown RBP18.32■□□□□ 0.52
H3F3B-209ENST00000589949 ARL13BQ3SXY8 428 aa18.32■□□□□ 0.52
H3F3B-209ENST00000589949 ATXN7L2Q5T6C5 722 aaPredicted RBP18.32■□□□□ 0.52
H3F3B-209ENST00000589949 C3orf20Q8ND61 904 aa18.32■□□□□ 0.52
H3F3B-209ENST00000589949 NTAN1Q96AB6 310 aa18.32■□□□□ 0.52
H3F3B-209ENST00000589949 TBC1D31Q96DN5 1066 aa18.32■□□□□ 0.52
H3F3B-209ENST00000589949 PPP1R16AQ96I34 528 aa18.32■□□□□ 0.52
H3F3B-209ENST00000589949 TDRD6O60522 2096 aaKnown RBP18.31■□□□□ 0.52
H3F3B-209ENST00000589949 LY6G6EA0A0G2JKS1 128 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 IGLON5A6NGN9 336 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 SIGLEC16A6NMB1 481 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 CCP110O43303 1012 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 AP1G1O43747 822 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 PIAS2O75928 621 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 ATP1A3P13637 1013 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 GPD1P21695 349 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 ACP1P24666 158 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 RPS21P63220 83 aaKnown RBP18.31■□□□□ 0.52
H3F3B-209ENST00000589949 INSM1Q01101 510 aaPredicted RBP18.31■□□□□ 0.52
H3F3B-209ENST00000589949 MYL5Q02045 173 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 OGDHQ02218 1023 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 UBXN1Q04323 297 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 CCDC15Q0P6D6 951 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 ZNF211Q13398 564 aaPredicted RBP18.31■□□□□ 0.52
H3F3B-209ENST00000589949 FZD2Q14332 565 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 PPP1R15BQ5SWA1 713 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 PDZD3Q86UT5 571 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 PLPP6Q8IY26 295 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 NEK11Q8NG66 645 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 OR4C6Q8NH72 309 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 ERGIC2Q96RQ1 377 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 C1QTNF2Q9BXJ5 285 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 MAGEH1Q9H213 219 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 KLF15Q9UIH9 416 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 U3KQA8 63 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 IGSF10Q6WRI0 2623 aa18.31■□□□□ 0.52
H3F3B-209ENST00000589949 CXorf51AA0A1B0GTR3 108 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 C16orf96A6NNT2 1141 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 KRIT1O00522 736 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 KDELR3O43731 214 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 RAMP2O60895 175 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 ITIH2P19823 946 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 POLD3Q15054 466 aaPredicted RBP18.3■□□□□ 0.52
H3F3B-209ENST00000589949 MYLK3Q32MK0 819 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 ZNF805Q5CZA5 627 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 LRRC73Q5JTD7 316 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 KIAA1161Q6NSJ0 714 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 PTAR1Q7Z6K3 402 aaPredicted RBP18.3■□□□□ 0.52
H3F3B-209ENST00000589949 RYBPQ8N488 228 aaPredicted RBP18.3■□□□□ 0.52
H3F3B-209ENST00000589949 OR2AP1Q8NGE2 309 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 RFFLQ8WZ73 363 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 FEM1CQ96JP0 617 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 PCMTD1Q96MG8 357 aaPredicted RBP18.3■□□□□ 0.52
H3F3B-209ENST00000589949 AGPAT1Q99943 283 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 SYT11Q9BT88 431 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 SELENOOQ9BVL4 669 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 TAS2R14Q9NYV8 317 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 DAAM1Q9Y4D1 1078 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 HS3ST3A1Q9Y663 406 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 BPTFQ12830 3046 aa18.3■□□□□ 0.52
H3F3B-209ENST00000589949 A0A087WV48 116 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 A6NNZ2 444 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 TLX3O43711 291 aaPredicted RBP18.29■□□□□ 0.52
H3F3B-209ENST00000589949 NEBLO76041 1014 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 GSRP00390 522 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 UGT2B4P06133 528 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 TPM2P07951 284 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 CDK4P11802 303 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 ETFBP38117 255 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 ZNF143P52747 638 aaPredicted RBP18.29■□□□□ 0.52
H3F3B-209ENST00000589949 ILKQ13418 452 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 KYAT3Q6YP21 454 aaKnown RBP18.29■□□□□ 0.52
H3F3B-209ENST00000589949 SLFN11Q7Z7L1 901 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 RTL3Q8N8U3 475 aaKnown RBP18.29■□□□□ 0.52
H3F3B-209ENST00000589949 LRIG1Q96JA1 1093 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 KLHL32Q96NJ5 620 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 MCEEQ96PE7 176 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 RETREG1Q9H6L5 497 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 SCUBE2Q9NQ36 999 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 SEPT11Q9NVA2 429 aaKnown RBP18.29■□□□□ 0.52
H3F3B-209ENST00000589949 ANO10Q9NW15 660 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 PNMA8BQ9ULN7 279 aaPredicted RBP18.29■□□□□ 0.52
H3F3B-209ENST00000589949 FZD10Q9ULW2 581 aa18.29■□□□□ 0.52
H3F3B-209ENST00000589949 SPTY2D1-AS1A0A0U1RR47 76 aa18.28■□□□□ 0.52
H3F3B-209ENST00000589949 AREL1O15033 823 aa18.28■□□□□ 0.52
H3F3B-209ENST00000589949 TEX33O43247 280 aa18.28■□□□□ 0.52
H3F3B-209ENST00000589949 TMCC1O94876 653 aa18.28■□□□□ 0.52
H3F3B-209ENST00000589949 CALB1P05937 261 aa18.28■□□□□ 0.52
H3F3B-209ENST00000589949 EPHB2P29323 1055 aa18.28■□□□□ 0.52
H3F3B-209ENST00000589949 HNF1BP35680 557 aa18.28■□□□□ 0.52
H3F3B-209ENST00000589949 SEMG2Q02383 582 aa18.28■□□□□ 0.52
H3F3B-209ENST00000589949 C1QBPQ07021 282 aaKnown RBP18.28■□□□□ 0.52
H3F3B-209ENST00000589949 COL9A2Q14055 689 aaPredicted RBP18.28■□□□□ 0.52
H3F3B-209ENST00000589949 STX1AQ16623 288 aa18.28■□□□□ 0.52
H3F3B-209ENST00000589949 SOWAHCQ53LP3 525 aaPredicted RBP18.28■□□□□ 0.52
H3F3B-209ENST00000589949 SCYL2Q6P3W7 929 aa18.28■□□□□ 0.52
H3F3B-209ENST00000589949 SASS6Q6UVJ0 657 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms