RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 MAGEC1O60732 1142 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 MAP3K6O95382 1288 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 BPGMP07738 259 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 NR2C2P49116 596 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 IFRD2Q12894 506 aaPredicted RBP14.88□□□□□ -0.03
CCDC43-203ENST00000588210 SEMA5AQ13591 1074 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 CCDC6Q16204 474 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 HSF5Q4G112 596 aaPredicted RBP14.88□□□□□ -0.03
CCDC43-203ENST00000588210 FAM182AQ5T1J6 154 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 CES4AQ5XG92 561 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 TRMT10BQ6PF06 316 aaKnown RBP14.88□□□□□ -0.03
CCDC43-203ENST00000588210 PIGZQ86VD9 579 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 NUDCD3Q8IVD9 361 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 ARID3BQ8IVW6 561 aaPredicted RBP14.88□□□□□ -0.03
CCDC43-203ENST00000588210 PDZD8Q8NEN9 1154 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 SCAMP5Q8TAC9 235 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 SLC35F5Q8WV83 523 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 MRPS31Q92665 395 aaKnown RBP14.88□□□□□ -0.03
CCDC43-203ENST00000588210 NXPE3Q969Y0 559 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 PCMTD2Q9NV79 361 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 NMRK1Q9NWW6 199 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 TRPM5Q9NZQ8 1165 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 ZFATQ9P243 1243 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 ARMCX1Q9P291 453 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 LIMD1Q9UGP4 676 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 HBS1LQ9Y450 684 aaKnown RBP14.88□□□□□ -0.03
CCDC43-203ENST00000588210 KRT36O76013 467 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 L1CAMP32004 1257 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 MRPS35P82673 323 aaKnown RBP14.88□□□□□ -0.03
CCDC43-203ENST00000588210 CYP4F8P98187 520 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 GBE1Q04446 702 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 TAF10Q12962 218 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 TBCCQ15814 346 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 MUM1Q2TAK8 710 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 PPP6R3Q5H9R7 873 aaPredicted RBP14.88□□□□□ -0.03
CCDC43-203ENST00000588210 RAB41Q5JT25 222 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 GPR158Q5T848 1215 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 STEAP4Q687X5 459 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 CYS1Q717R9 158 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 ARCQ7LC44 396 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 CRLF3Q8IUI8 442 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 MPP5Q8N3R9 675 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 CENPIQ92674 756 aaPredicted RBP14.88□□□□□ -0.03
CCDC43-203ENST00000588210 FBXO32Q969P5 355 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 TASP1Q9H6P5 420 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 CD320Q9NPF0 282 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 IGSF9Q9P2J2 1179 aa14.88□□□□□ -0.03
CCDC43-203ENST00000588210 PATJQ8NI35 1801 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 GABBR2O75899 941 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 SCNN1AP37088 669 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 SLC34A1Q06495 639 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 STXBP5Q5T5C0 1151 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 POTEHQ6S545 545 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 MTSS1LQ765P7 747 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 MARK2Q7KZI7 788 aaKnown RBP14.87□□□□□ -0.03
CCDC43-203ENST00000588210 GPRIN1Q7Z2K8 1008 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 TREML1Q86YW5 311 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 TMPRSS6Q8IU80 811 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 NDUFAF2Q8N183 169 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 WDR60Q8WVS4 1066 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 KCTD13Q8WZ19 329 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 SPDL1Q96EA4 605 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 SIKE1Q9BRV8 207 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 SLC13A1Q9BZW2 595 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 MOCS1Q9NZB8 636 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 STX18Q9P2W9 335 aaKnown RBP14.87□□□□□ -0.03
CCDC43-203ENST00000588210 PPARGC1AQ9UBK2 798 aaKnown RBP14.87□□□□□ -0.03
CCDC43-203ENST00000588210 MAD1L1Q9Y6D9 718 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 USP3Q9Y6I4 520 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 A0A0C4DFX4 3053 aa14.87□□□□□ -0.03
CCDC43-203ENST00000588210 ANHXE9PGG2 379 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 WEE1P30291 646 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 PGM1P36871 562 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 WASHC5Q12768 1159 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 SLC10A2Q12908 348 aaPredicted RBP14.86□□□□□ -0.03
CCDC43-203ENST00000588210 SNX30Q5VWJ9 437 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 KYAT3Q6YP21 454 aaKnown RBP14.86□□□□□ -0.03
CCDC43-203ENST00000588210 SLC26A9Q7LBE3 791 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 MON1AQ86VX9 555 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 RNF135Q8IUD6 432 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 SCUBE3Q8IX30 993 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 DEPDC1BQ8WUY9 529 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 STMN2Q93045 179 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 ZSWIM3Q96MP5 696 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 ASB16Q96NS5 453 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 KCNK12Q9HB15 430 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 TAGLN3Q9UI15 199 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 SCML2Q9UQR0 700 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 MYO18AQ92614 2054 aaKnown RBP14.86□□□□□ -0.03
CCDC43-203ENST00000588210 DENND4CQ5VZ89 1909 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 ZNF840PA6NDX5 716 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 F8W8V4 182 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 CAPN9O14815 690 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 ALDH1A2O94788 518 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 MLNP12872 115 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 PFKLP17858 780 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 LRRC74BQ6ZQY2 392 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 PDCD7Q8N8D1 485 aaKnown RBP14.86□□□□□ -0.03
CCDC43-203ENST00000588210 ZSCAN18Q8TBC5 510 aaPredicted RBP14.86□□□□□ -0.03
CCDC43-203ENST00000588210 ACMSDQ8TDX5 336 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms