RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 DKK4Q9UBT3 224 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 GGT7Q9UJ14 662 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 ITM2BQ9Y287 266 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 APC2O95996 2303 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 TCRBV5S1A1TA0A578 114 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 IGLON5A6NGN9 336 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 LRRC10BA6NIK2 292 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 C16orf96A6NNT2 1141 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 KRIT1O00522 736 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 UGT2B4P06133 528 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 MYF5P13349 255 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 ATP1A3P13637 1013 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 RPL7AP62424 266 aaKnown RBP14.58□□□□□ -0.08
VMP1-206ENST00000587945 POLD3Q15054 466 aaPredicted RBP14.58□□□□□ -0.08
VMP1-206ENST00000587945 KIAA1161Q6NSJ0 714 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 DNAJC24Q6P3W2 148 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 SLFN11Q7Z7L1 901 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 ZNF354CQ86Y25 554 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 FEM1CQ96JP0 617 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 MCEEQ96PE7 176 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 KLC2Q9H0B6 622 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 NOL6Q9H6R4 1146 aaKnown RBP14.58□□□□□ -0.08
VMP1-206ENST00000587945 HPCAL4Q9UM19 191 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 CACNA1GO43497 2377 aa14.58□□□□□ -0.08
VMP1-206ENST00000587945 DSPP15924 2871 aaKnown RBP14.57□□□□□ -0.08
VMP1-206ENST00000587945 A6NNZ2 444 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 SPINT1O43278 529 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 BUB1O43683 1085 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 KDELR3O43731 214 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 AP1G1O43747 822 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 CREB3O43889 395 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 PIAS2O75928 621 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 TMCC1O94876 653 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 GIMD1P0DJR0 217 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 CDK4P11802 303 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 EPHB2P29323 1055 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 HNF1BP35680 557 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 ZNF143P52747 638 aaPredicted RBP14.57□□□□□ -0.08
VMP1-206ENST00000587945 SNRPD1P62314 119 aaKnown RBP14.57□□□□□ -0.08
VMP1-206ENST00000587945 C1QBPQ07021 282 aaKnown RBP14.57□□□□□ -0.08
VMP1-206ENST00000587945 ZNF211Q13398 564 aaPredicted RBP14.57□□□□□ -0.08
VMP1-206ENST00000587945 MYLK3Q32MK0 819 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 ZNF805Q5CZA5 627 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 EFHC2Q5JST6 749 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 LRRC73Q5JTD7 316 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 TMC6Q7Z403 805 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 PLPP6Q8IY26 295 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 AOPEPQ8N6M6 819 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 RTL3Q8N8U3 475 aaKnown RBP14.57□□□□□ -0.08
VMP1-206ENST00000587945 OR2AP1Q8NGE2 309 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 OR4C6Q8NH72 309 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 BAP1Q92560 729 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 HMCESQ96FZ2 354 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 KLHL32Q96NJ5 620 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 RETREG1Q9H6L5 497 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 DNAJC28Q9NX36 388 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 TAS2R14Q9NYV8 317 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 HS3ST3A1Q9Y663 406 aa14.57□□□□□ -0.08
VMP1-206ENST00000587945 GOLGA4Q13439 2230 aaKnown RBP14.57□□□□□ -0.08
VMP1-206ENST00000587945 ANKRD11Q6UB99 2663 aaPredicted RBP14.56□□□□□ -0.08
VMP1-206ENST00000587945 NEMP1O14524 444 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 TEX33O43247 280 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 NEBLO76041 1014 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 POP4O95707 220 aaKnown RBP14.56□□□□□ -0.08
VMP1-206ENST00000587945 GSRP00390 522 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 ITIH2P19823 946 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 ACP1P24666 158 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 GEMIN4P57678 1058 aaKnown RBP14.56□□□□□ -0.08
VMP1-206ENST00000587945 DAB2P98082 770 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 INSM1Q01101 510 aaPredicted RBP14.56□□□□□ -0.08
VMP1-206ENST00000587945 OGDHQ02218 1023 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 SGCGQ13326 291 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 ILKQ13418 452 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 FZD2Q14332 565 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 PPP1R15BQ5SWA1 713 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 TPRG1LQ5T0D9 272 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 CCDC183Q5T5S1 534 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 ACAD10Q6JQN1 1059 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 KYAT3Q6YP21 454 aaKnown RBP14.56□□□□□ -0.08
VMP1-206ENST00000587945 PDZD3Q86UT5 571 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 DNAAF5Q86Y56 855 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 MCOLN2Q8IZK6 566 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 KLF6Q99612 283 aaPredicted RBP14.56□□□□□ -0.08
VMP1-206ENST00000587945 GPATCH2LQ9NWQ4 482 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 FZD10Q9ULW2 581 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 NYNRINQ9P2P1 1898 aaKnown RBP14.56□□□□□ -0.08
VMP1-206ENST00000587945 PTPRBP23467 1997 aa14.56□□□□□ -0.08
VMP1-206ENST00000587945 CXorf51AA0A1B0GTR3 108 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 TMCO5BA8MYB1 307 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 RASA4BC9J798 803 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 INSIG1O15503 277 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 RASA4O43374 803 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 TSPAN6O43657 245 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 FERP16591 822 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 SEMG2Q02383 582 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 TYRO3Q06418 890 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 HS1BP3Q53T59 392 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 DCUN1D2Q6PH85 259 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 GDPD4Q6W3E5 623 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 IRF2BP2Q7Z5L9 587 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms