RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 LIFRP42702 1097 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 NOVP48745 357 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 PXNP49023 591 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 SLC11A2P49281 568 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 RARRES1P49788 294 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 PDE1AP54750 535 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 KRTAP10-2P60368 255 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 DGCR2P98153 550 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 GALNT2Q10471 571 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 LAMB3Q13751 1172 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 BMPR2Q13873 1038 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 DCTN1Q14203 1278 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 E2F2Q14209 437 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 MCMDC2Q4G0Z9 681 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 CCDC92Q53HC0 331 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 NIPA1Q7RTP0 329 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 ZNF551Q7Z340 670 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 SNX32Q86XE0 403 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 SLC44A2Q8IWA5 706 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 SLC15A3Q8IY34 581 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 LILRA3Q8N6C8 439 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 APPL2Q8NEU8 664 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 CCDC148Q8NFR7 591 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 OR2I1PQ8NGU4 316 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 KCNG4Q8TDN1 519 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 HASPINQ8TF76 798 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 SAAL1Q96ER3 474 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 PTCD3Q96EY7 689 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 HMCESQ96FZ2 354 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 SLC46A1Q96NT5 459 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 JPH2Q9BR39 696 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 C11orf49Q9H6J7 331 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 KAT14Q9H8E8 782 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 MLXIPQ9HAP2 919 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 RLIMQ9NVW2 624 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 PAG1Q9NWQ8 432 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 KCTD5Q9NXV2 234 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 TAB2Q9NYJ8 693 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 CUL9Q8IWT3 2517 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 MED19A0JLT2 244 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 F5H697 171 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 KLK10O43240 276 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 KCNQ3O43525 872 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 KIF20AO95235 890 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 ERBB2P04626 1255 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 ATXN1LP0C7T5 689 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 ACADMP11310 421 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 NPPBP16860 134 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 STAT1P42224 750 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 RAD52P43351 418 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 PPP3CAQ08209 521 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 KCNAB1Q14722 419 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 CRYMQ14894 314 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 SEC23BQ15437 767 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 FAM110CQ1W6H9 321 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 PRAMEF14Q5SWL7 426 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 SPATA1Q5VX52 437 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 MOXD1Q6UVY6 613 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 ATG9AQ7Z3C6 839 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 KDELC2Q7Z4H8 507 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 MSANTD4Q8NCY6 345 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 NEK9Q8TD19 979 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 LINC00476Q8WZB0 136 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 MSLNLQ96KJ4 702 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 IWS1Q96ST2 819 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 CD180Q99467 661 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 TINAGL1Q9GZM7 467 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 EHD3Q9NZN3 535 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 TBC1D7Q9P0N9 293 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 COL20A1Q9P218 1284 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 LIMA1Q9UHB6 759 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 ANAPC5Q9UJX4 755 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 ING1Q9UK53 422 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 AGTPBP1Q9UPW5 1226 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 FRMD4BQ9Y2L6 1034 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 A0A1W2PR48 441 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 PSMD14O00487 310 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 JTBO76095 146 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 SLU7O95391 586 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 TOP1P11387 765 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 VDRP11473 427 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 KRT10P13645 584 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 GCH1P30793 250 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 ADRA1BP35368 520 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 RGS2P41220 211 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 ALDH1A3P47895 512 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 RABGGTBP53611 331 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 POLGP54098 1239 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 CTXN3Q4LDR2 81 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 NFRKBQ6P4R8 1299 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 ENOSF1Q7L5Y1 443 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 MAPKAPK5Q8IW41 473 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 CCDC28AQ8IWP9 274 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 ZNF444Q8N0Y2 327 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 ETNPPLQ8TBG4 499 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 IFI44Q8TCB0 444 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 THAP4Q8WY91 577 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 RADILQ96JH8 1075 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 BAG1Q99933 345 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms