RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 CAMK1GQ96NX5 476 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 ELF4Q99607 663 aaPredicted RBP13.38□□□□□ -0.27
ERBB2-220ENST00000584684 CDC6Q99741 560 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 CNTNAP3Q9BZ76 1288 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 TM6SF2Q9BZW4 377 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 LRRC19Q9H756 370 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 GDF3Q9NR23 364 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 HECAQ9UBI9 543 aaPredicted RBP13.38□□□□□ -0.27
ERBB2-220ENST00000584684 NENFQ9UMX5 172 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 MFHAS1Q9Y4C4 1052 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 ACTL7AQ9Y615 435 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 ASPMQ8IZT6 3477 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 DOCK9Q9BZ29 2069 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 TLR4O00206 839 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 EEF2KO00418 725 aaKnown RBP13.37□□□□□ -0.27
ERBB2-220ENST00000584684 WNT9AO14904 365 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 BUB1O43683 1085 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 MAGEC1O60732 1142 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 POP4O95707 220 aaKnown RBP13.37□□□□□ -0.27
ERBB2-220ENST00000584684 DNA2P51530 1060 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 FOXC1Q12948 553 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 TRIM14Q14142 442 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 CA9Q16790 459 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 ZNF805Q5CZA5 627 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 AFMIDQ63HM1 303 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 KIAA1161Q6NSJ0 714 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 RFX8Q6ZV50 586 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 PARS2Q7L3T8 475 aaKnown RBP13.37□□□□□ -0.27
ERBB2-220ENST00000584684 DNAAF5Q86Y56 855 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 FAM174AQ8TBP5 190 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 KCTD15Q96SI1 283 aaPredicted RBP13.37□□□□□ -0.27
ERBB2-220ENST00000584684 XPO4Q9C0E2 1151 aaKnown RBP13.37□□□□□ -0.27
ERBB2-220ENST00000584684 KLC2Q9H0B6 622 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 DHX35Q9H5Z1 703 aaKnown RBP13.37□□□□□ -0.27
ERBB2-220ENST00000584684 ZDHHC6Q9H6R6 413 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 PDFQ9HBH1 243 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 GPATCH2LQ9NWQ4 482 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 PCDHB9Q9Y5E1 797 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.37□□□□□ -0.27
ERBB2-220ENST00000584684 TRPM6Q9BX84 2022 aa13.37□□□□□ -0.27
ERBB2-220ENST00000584684 A0A087X0T9 212 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 A0A1W2PQU0 124 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 CBFA2T2O43439 604 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 PRAMEF11O60813 436 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 DKK1O94907 266 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 IGSF6O95976 241 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 CYP1A2P05177 515 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 FAM228BP0C875 321 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 MAT2AP31153 395 aaKnown RBP13.36□□□□□ -0.27
ERBB2-220ENST00000584684 CASP14P31944 242 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 RXRGP48443 463 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 ARRB1P49407 418 aaPredicted RBP13.36□□□□□ -0.27
ERBB2-220ENST00000584684 DPYSQ14117 519 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 PIGHQ14442 188 aaPredicted RBP13.36□□□□□ -0.27
ERBB2-220ENST00000584684 DPYSL2Q16555 572 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 MYLK3Q32MK0 819 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 SPECC1LQ69YQ0 1117 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 RAB44Q7Z6P3 723 aaPredicted RBP13.36□□□□□ -0.27
ERBB2-220ENST00000584684 ARHGEF26Q96DR7 871 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 DNAJC7Q99615 494 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 THAP2Q9H0W7 228 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 DKK3Q9UBP4 350 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 PCSK1NQ9UHG2 260 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 ZFR2Q9UPR6 939 aaKnown RBP13.36□□□□□ -0.27
ERBB2-220ENST00000584684 NEUROG3Q9Y4Z2 214 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 FADS3Q9Y5Q0 445 aa13.36□□□□□ -0.27
ERBB2-220ENST00000584684 FAM221BA6H8Z2 402 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 ARHGAP42A6NI28 874 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 C16orf96A6NNT2 1141 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 KRIT1O00522 736 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 TSPAN6O43657 245 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 FTH1P19P0C7X4 201 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 HNRNPA2B1P22626 353 aaKnown RBP13.35□□□□□ -0.27
ERBB2-220ENST00000584684 EPHA8P29322 1005 aaPredicted RBP13.35□□□□□ -0.27
ERBB2-220ENST00000584684 AKT2P31751 481 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 RHOAP61586 193 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 RPS21P63220 83 aaKnown RBP13.35□□□□□ -0.27
ERBB2-220ENST00000584684 STAT4Q14765 748 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 GRM3Q14832 879 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 SHBQ15464 509 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 ALKBH5Q6P6C2 394 aaKnown RBP13.35□□□□□ -0.27
ERBB2-220ENST00000584684 FBXL19Q6PCT2 694 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 ABI3BPQ7Z7G0 1075 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 SPATS2Q86XZ4 545 aaKnown RBP13.35□□□□□ -0.27
ERBB2-220ENST00000584684 ZNF354CQ86Y25 554 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 OR6K2Q8NGY2 324 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 SETD7Q8WTS6 366 aaKnown RBP13.35□□□□□ -0.27
ERBB2-220ENST00000584684 TEKT4Q8WW24 435 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 ASB12Q8WXK4 309 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 ADAMTS14Q8WXS8 1223 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.35□□□□□ -0.27
ERBB2-220ENST00000584684 CPEB1Q9BZB8 566 aaKnown RBP13.35□□□□□ -0.27
ERBB2-220ENST00000584684 TSPY26PQ9H489 355 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 GPR27Q9NS67 375 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 MYO1AQ9UBC5 1043 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 LHX3Q9UBR4 397 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 UBA2Q9UBT2 640 aaPredicted RBP13.35□□□□□ -0.27
ERBB2-220ENST00000584684 IP6K2Q9UHH9 426 aa13.35□□□□□ -0.27
ERBB2-220ENST00000584684 APOBEC2Q9Y235 224 aaKnown RBP13.35□□□□□ -0.27
ERBB2-220ENST00000584684 BTBD3Q9Y2F9 522 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms