RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 HNRNPA1P09651 372 aaKnown RBP eCLIP6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 ERVK-10P10266 1014 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 ALADP13716 330 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 KRT4P19013 534 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 CA4P22748 312 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 CES1P23141 567 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 ADRA1DP25100 572 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 DDX6P26196 483 aaKnown RBP eCLIP6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 NMBRP28336 390 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 HOXA9P31269 272 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 RPA3P35244 121 aaPredicted RBP6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 GP5P40197 560 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 CD86P42081 329 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 SERPINH1P50454 418 aaKnown RBP6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 NEK3P51956 506 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 CSE1LP55060 971 aaKnown RBP6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 ZXDBP98169 803 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 IL9RQ01113 521 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 MSLNQ13421 630 aaPredicted RBP6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 CAMK1Q14012 370 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 IHHQ14623 411 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 LRRC14Q15048 493 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 CYTH1Q15438 398 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 SLC1A5Q15758 541 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 TEDDM1Q5T9Z0 273 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 GRTP1Q5TC63 336 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 HHATQ5VTY9 493 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 RNF219Q5W0B1 726 aaPredicted RBP6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 PDPK2PQ6A1A2 396 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 IL31Q6EBC2 164 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 PDE12Q6L8Q7 609 aaKnown RBP6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 CXorf57Q6NSI4 855 aaKnown RBP6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 KCNMB4Q86W47 210 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 RASSF3Q86WH2 238 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 LRRC34Q8IZ02 419 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 CARNMT1Q8N4J0 409 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 MAB21L3Q8N8X9 362 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 LEMD2Q8NC56 503 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 GDAP1Q8TB36 358 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 SHKBP1Q8TBC3 707 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 ACMSDQ8TDX5 336 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 MFSD3Q96ES6 412 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 TMA16Q96EY4 203 aaKnown RBP6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 CHMP6Q96FZ7 201 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 APOPT1Q96IL0 206 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 FEM1CQ96JP0 617 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 CPNE1Q99829 537 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 SEMA3CQ99985 751 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 MGME1Q9BQP7 344 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 SPON2Q9BUD6 331 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 CINPQ9BW66 212 aaPredicted RBP6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 FSD1LQ9BXM9 530 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 SLC46A2Q9BY10 475 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 PRKD2Q9BZL6 878 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 POLR1EQ9GZS1 481 aaKnown RBP6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 RABEP2Q9H5N1 569 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 MAN1C1Q9NR34 630 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 CHRAC1Q9NRG0 131 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 MKS1Q9NXB0 559 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 NSMCE4AQ9NXX6 385 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 ZFATQ9P243 1243 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 CFAP97Q9P2B7 532 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 UBA2Q9UBT2 640 aaPredicted RBP6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 ARHGAP26Q9UNA1 814 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 SH3BP1Q9Y3L3 701 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 TCAF1Q9Y4C2 921 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 OR51B4Q9Y5P0 310 aa6.22□□□□□ -1.41
TRAPPC1-204ENST00000571947 E2F8A0AVK6 867 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 HEATR9A2RTY3 570 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 TCP11X1B4DZS4 312 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 H0Y626 953 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 LEFTY2O00292 366 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 NRG2O14511 850 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 COPEO14579 308 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 MUSKO15146 869 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 SIN3BO75182 1162 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 MOSPD3O75425 235 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 ZMPSTE24O75844 475 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 ARHGEF15O94989 841 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 PAPSS2O95340 614 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 FGF1P05230 155 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 VIMP08670 466 aaKnown RBP6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 SERPINF2P08697 491 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 POU2F2P09086 479 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 DHRS4L1P0CG22 281 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 PYGBP11216 843 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 MYOGP15173 224 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 GJA1P17302 382 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 CR2P20023 1033 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 HLA-DPA1P20036 260 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 TAC1P20366 129 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 GLDCP23378 1020 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 FOXN2P32314 431 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 SPRP35270 261 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 IRS1P35568 1242 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 CCR2P41597 374 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 CHRNA4P43681 627 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 CCT5P48643 541 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 ERVK-21P61565 698 aa6.21□□□□□ -1.42
TRAPPC1-204ENST00000571947 ARF5P84085 180 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms