RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 AP4S1Q9Y587 144 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 PCDHGA7Q9Y5G6 932 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 A0A0G2JLL6 359 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-205ENST00000571272 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-205ENST00000571272 ZBTB7AO95365 584 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 MT-CYBP00156 380 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-205ENST00000571272 NCAM1P13591 858 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 ADSLP30566 484 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-205ENST00000571272 HSPA13P48723 471 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 TAF6P49848 677 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 CSRP3P50461 194 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 NR1H2P55055 460 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 FRG1Q14331 258 aaKnown RBP17.68■□□□□ 0.42
SCARF1-205ENST00000571272 TAPT1Q6NXT6 567 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 CNSTQ6PJW8 725 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 CLEC20AQ6ZU45 233 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 KDELC2Q7Z4H8 507 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 PRRT2Q7Z6L0 340 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-205ENST00000571272 TXNDC5Q8NBS9 432 aaKnown RBP17.68■□□□□ 0.42
SCARF1-205ENST00000571272 CEP70Q8NHQ1 597 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 TMIGD2Q96BF3 282 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 GPRC5DQ9NZD1 345 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 CCDC167Q9P0B6 97 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 SNX13Q9Y5W8 968 aa17.68■□□□□ 0.42
SCARF1-205ENST00000571272 TNS1Q9HBL0 1735 aaKnown RBP17.67■□□□□ 0.42
SCARF1-205ENST00000571272 FAM95CA0A1B0GW59 222 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 ARHGAP10A1A4S6 786 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 PDLIM1O00151 329 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 FAM200BP0CF97 657 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 ESRP1Q6NXG1 681 aaKnown RBP17.67■□□□□ 0.42
SCARF1-205ENST00000571272 ALKAL1Q6UXT8 129 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 RNF135Q8IUD6 432 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 MYO1HQ8N1T3 1032 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 TEKT5Q96M29 485 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 GPR78Q96P69 363 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 HNRNPABQ99729 332 aaKnown RBP17.67■□□□□ 0.42
SCARF1-205ENST00000571272 SLC2A11Q9BYW1 496 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 C9IYK1 514 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 CDK4P11802 303 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 STMN1P16949 149 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 EPHX2P34913 555 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 HADHAP40939 763 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 HK2P52789 917 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 RAB10P61026 200 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 SEMA3BQ13214 749 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 TRIM25Q14258 630 aaKnown RBP17.67■□□□□ 0.42
SCARF1-205ENST00000571272 RFTN1Q14699 578 aaPredicted RBP17.67■□□□□ 0.42
SCARF1-205ENST00000571272 MAMDC4Q6UXC1 1216 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 TRIML2Q8N7C3 387 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 PPTC7Q8NI37 304 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 DDI1Q8WTU0 396 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 EDEM1Q92611 657 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 ASB9Q96DX5 294 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 SLC2A13Q96QE2 648 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 CCT7Q99832 543 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 POMKQ9H5K3 350 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 CAAP1Q9H8G2 361 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 LIN28AQ9H9Z2 209 aaKnown RBP17.67■□□□□ 0.42
SCARF1-205ENST00000571272 TRHDEQ9UKU6 1024 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 TLL2Q9Y6L7 1015 aa17.67■□□□□ 0.42
SCARF1-205ENST00000571272 ARHGEF37A1IGU5 675 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 MT-CO1P00395 513 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 YBX3P16989 372 aaKnown RBP eCLIP17.66■□□□□ 0.42
SCARF1-205ENST00000571272 PRKAA2P54646 552 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 HPCAP84074 193 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 PPP1R3AQ16821 1122 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 NAPEPLDQ6IQ20 393 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 NOTUMQ6P988 496 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 TRIM67Q6ZTA4 783 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 IPMKQ8NFU5 416 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 TSPAN14Q8NG11 270 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 HDAC11Q96DB2 347 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 ELMO2Q96JJ3 720 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 ZNF560Q96MR9 790 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 SLC29A1Q99808 456 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 CHST12Q9NRB3 414 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 CACNG4Q9UBN1 327 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 SLC2A6Q9UGQ3 507 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 PPP2R3BQ9Y5P8 575 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 HEMK1Q9Y5R4 338 aaPredicted RBP17.66■□□□□ 0.42
SCARF1-205ENST00000571272 CEPT1Q9Y6K0 416 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 ZSWIM8A7E2V4 1837 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 ASB14A6NK59 587 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 ADM5C9JUS6 153 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 NCAM2O15394 837 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 USP17L7P0C7H9 530 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 CYP2C9P11712 490 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 CDH2P19022 906 aaPredicted RBP17.66■□□□□ 0.42
SCARF1-205ENST00000571272 PLK1P53350 603 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 TAS2R39P59534 338 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 MTX3Q5HYI7 312 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 CHERPQ8IWX8 916 aaKnown RBP17.66■□□□□ 0.42
SCARF1-205ENST00000571272 PNPLA1Q8N8W4 532 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 HMGCLL1Q8TB92 370 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 LPGAT1Q92604 370 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 CIB1Q99828 191 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 KIFC1Q9BW19 673 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 OSBPL2Q9H1P3 480 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 TNFRSF12AQ9NP84 129 aa17.66■□□□□ 0.42
SCARF1-205ENST00000571272 GDAP2Q9NXN4 497 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms