RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 TTC16Q8NEE8 873 aa8.88□□□□□ -0.99
LINC00558-201ENST00000569422 NXNL1Q96CM4 212 aa8.88□□□□□ -0.99
LINC00558-201ENST00000569422 TBL1YQ9BQ87 522 aa8.88□□□□□ -0.99
LINC00558-201ENST00000569422 ACBD6Q9BR61 282 aa8.88□□□□□ -0.99
LINC00558-201ENST00000569422 PLA2G4CQ9UP65 541 aa8.88□□□□□ -0.99
LINC00558-201ENST00000569422 TMEM98Q9Y2Y6 226 aa8.88□□□□□ -0.99
LINC00558-201ENST00000569422 ZBTB14O43829 449 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 B4GALT3O60512 393 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 RNASEH2AO75792 299 aaKnown RBP8.87□□□□□ -0.99
LINC00558-201ENST00000569422 PIGNO95427 931 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 HLA-DQB2P05538 268 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 CCR1P32246 355 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 NPY2RP49146 381 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 EFEMP1Q12805 493 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 CCDC153Q494R4 210 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 PPM1LQ5SGD2 360 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 ZNF470Q6ECI4 717 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 FRMD7Q6ZUT3 714 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 HPS6Q86YV9 775 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 RAB3IL1Q8TBN0 382 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 PLEKHG4BQ96PX9 1271 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 BRD8Q9H0E9 1235 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 TRPV6Q9H1D0 765 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 NT5MQ9NPB1 228 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 PPM1HQ9ULR3 514 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 TMEM233B4DJY2 109 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 IRAK2O43187 625 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 MTSS1O43312 755 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 MT-CO1P00395 513 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 ARSAP15289 507 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 CCND3P30281 292 aaPredicted RBP8.87□□□□□ -0.99
LINC00558-201ENST00000569422 RPL9P32969 192 aaKnown RBP8.87□□□□□ -0.99
LINC00558-201ENST00000569422 PAPOLAP51003 745 aaKnown RBP8.87□□□□□ -0.99
LINC00558-201ENST00000569422 TMED1Q13445 227 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 ARL13AQ5H913 290 aaPredicted RBP8.87□□□□□ -0.99
LINC00558-201ENST00000569422 FAAH2Q6GMR7 532 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 ANO7Q6IWH7 933 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 PTAR1Q7Z6K3 402 aaPredicted RBP8.87□□□□□ -0.99
LINC00558-201ENST00000569422 IFNL1Q8IU54 200 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 CEP97Q8IW35 865 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 FSTL5Q8N475 847 aaPredicted RBP8.87□□□□□ -0.99
LINC00558-201ENST00000569422 TTC9BQ8N6N2 239 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 SLC43A3Q8NBI5 491 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 CATSPER2Q96P56 530 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 DDX50Q9BQ39 737 aaKnown RBP8.87□□□□□ -0.99
LINC00558-201ENST00000569422 ZFYVE28Q9HCC9 887 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 OSER1Q9NX31 292 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 XPR1Q9UBH6 696 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 SLC27A5Q9Y2P5 690 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 LRRC42Q9Y546 428 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 LAMA2P24043 3122 aaKnown RBP8.87□□□□□ -0.99
LINC00558-201ENST00000569422 SF3B1O75533 1304 aaKnown RBP eCLIP8.87□□□□□ -0.99
LINC00558-201ENST00000569422 MAP3K7O43318 606 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 MAFKO60675 156 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 GJB3O75712 270 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 KLHL2O95198 593 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 HNRNPLP14866 589 aaKnown RBP eCLIP8.87□□□□□ -0.99
LINC00558-201ENST00000569422 TSPAN8P19075 237 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 AIF1P55008 147 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 SLC12A2P55011 1212 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 CSHL1Q14406 222 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 LPIN1Q14693 890 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 SLC5A9Q2M3M2 681 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 DNAL1Q4LDG9 190 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 ZNF789Q5FWF6 425 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 ISLR2Q6UXK2 745 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 SERINC5Q86VE9 423 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 ZC3HC1Q86WB0 502 aaKnown RBP8.87□□□□□ -0.99
LINC00558-201ENST00000569422 ARHGAP12Q8IWW6 846 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 SNX31Q8N9S9 440 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 DRAXINQ8NBI3 349 aaPredicted RBP8.87□□□□□ -0.99
LINC00558-201ENST00000569422 ATAD1Q8NBU5 361 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 OR6P1Q8NGX9 317 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 LENG8Q96PV6 779 aaPredicted RBP8.87□□□□□ -0.99
LINC00558-201ENST00000569422 CDH19Q9H159 772 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 GLOD4Q9HC38 313 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 DCAF16Q9NXF7 216 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 BPTFQ12830 3046 aa8.87□□□□□ -0.99
LINC00558-201ENST00000569422 TTC3P53804 2025 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 A0A088AWK7 358 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 FAM95CA0A1B0GW59 222 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 E9PAM4 449 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 J3KR12 359 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 CNTN5O94779 1100 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 MYCP01106 439 aaPredicted RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 SLC4A1P02730 911 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 MPOP05164 745 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 JUNP05412 331 aaKnown RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 CCDC159P0C7I6 412 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 PIRTP0C851 137 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 UBTFL6P0CB48 400 aaPredicted RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 ATP6V1C1P21283 382 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 PBX3P40426 434 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 SLC1A2P43004 574 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 HCAR3P49019 387 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 COG7P83436 770 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 TUSC3Q13454 348 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 NAB1Q13506 487 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 PSMD5Q16401 504 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 INSCQ1MX18 579 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms