RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 PPM1LQ5SGD2 360 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 AGMOQ6ZNB7 445 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 LINC00299Q6ZSB3 139 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 CLEC14AQ86T13 490 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TTC30AQ86WT1 665 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 SNX32Q86XE0 403 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 UNC5BQ8IZJ1 945 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 SLC15A4Q8N697 577 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 ZNF781Q8N8C0 355 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TRPV1Q8NER1 839 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 PPP1R14CQ8TAE6 165 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 SPATA18Q8TC71 538 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 SEPT1Q8WYJ6 367 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 YTHDF1Q9BYJ9 559 aaKnown RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 HAPLN2Q9GZV7 340 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 ARMC7Q9H6L4 198 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 NANOGQ9H9S0 305 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 WDR41Q9HAD4 459 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 CXorf21Q9HAI6 301 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 ZBTB26Q9HCK0 441 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 RNF19AQ9NV58 838 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 ATAD3AQ9NVI7 634 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 ARMC1Q9NVT9 282 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 CD300AQ9UGN4 299 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 NUB1Q9Y5A7 615 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 COL1A2P08123 1366 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 CITO14578 2027 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TSC2P49815 1807 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 HAS3O00219 553 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TPP1O14773 563 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 MMP3P08254 477 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 CYBAP13498 195 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 RFC1P35251 1148 aaPredicted RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 SLC26A2P50443 739 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 HNRNPFP52597 415 aaKnown RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 CDH15P55291 814 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 CD300CQ08708 224 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 NFATC3Q12968 1075 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TRIM25Q14258 630 aaKnown RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 CBX2Q14781 532 aaPredicted RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 EMC2Q15006 297 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 INAQ16352 499 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 NRF1Q16656 503 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 NDUFA5Q16718 116 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 HADHQ16836 314 aaKnown RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 MARCH8Q5T0T0 291 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 AGAP7PQ5VUJ5 663 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TMEM92Q6UXU6 159 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 NAPRTQ6XQN6 538 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 SIX5Q8N196 739 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TMEM35BQ8NCS4 154 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 OR13F1Q8NGS4 319 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 ATP6V1E2Q96A05 226 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 THAP11Q96EK4 314 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 ALPK1Q96QP1 1244 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 APBA2Q99767 749 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 NFKBIZQ9BYH8 718 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 UPF3AQ9H1J1 476 aaKnown RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 LHX5Q9H2C1 402 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 ADAMTS10Q9H324 1103 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TMEM134Q9H6X4 195 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 GPN2Q9H9Y4 310 aaPredicted RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TCF7L2Q9NQB0 619 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 XPNPEP3Q9NQH7 507 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 GID8Q9NWU2 228 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TMEM216Q9P0N5 145 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 DNMT3BQ9UBC3 853 aaKnown RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 KLHL3Q9UH77 587 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 KLF15Q9UIH9 416 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 PACSIN3Q9UKS6 424 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 COLQQ9Y215 455 aaPredicted RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 PCDHGA7Q9Y5G6 932 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 A0A1W2PPW3 197 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 ZNF487B1APH4 448 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 FAM47E-STBD1D6RA91 191 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 AIM2O14862 343 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 GRID2O43424 1007 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 FOXD2O60548 495 aaPredicted RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 C22orf31O95567 290 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 ADCYAP1R1P41586 468 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 SOX10P56693 466 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TTLL4Q14679 1199 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 CCL14Q16627 93 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 CYP2A13Q16696 494 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 MAP7D1Q3KQU3 841 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 DCUN1D2Q6PH85 259 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 XKR5Q6UX68 686 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 FRA10AC1Q70Z53 315 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 CYP2U1Q7Z449 544 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 RFX6Q8HWS3 928 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 MYO1HQ8N1T3 1032 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 MPP5Q8N3R9 675 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 SOCS4Q8WXH5 440 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 LRTOMTQ8WZ04 291 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 RCN3Q96D15 328 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 ANKRD36BP1Q96IX9 119 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 MAELQ96JY0 434 aaKnown RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TCHPQ9BT92 498 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 MCMBPQ9BTE3 642 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms