RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 DNASE2BQ8WZ79 361 aa12.6□□□□□ -0.39
RNF40-211ENST00000567365 ALG3Q92685 438 aa12.6□□□□□ -0.39
RNF40-211ENST00000567365 HDAC11Q96DB2 347 aa12.6□□□□□ -0.39
RNF40-211ENST00000567365 HERPUD2Q9BSE4 406 aa12.6□□□□□ -0.39
RNF40-211ENST00000567365 GPR174Q9BXC1 333 aa12.6□□□□□ -0.39
RNF40-211ENST00000567365 HDAC8Q9BY41 377 aa12.6□□□□□ -0.39
RNF40-211ENST00000567365 CPEB1Q9BZB8 566 aaKnown RBP12.6□□□□□ -0.39
RNF40-211ENST00000567365 TSGA10Q9BZW7 698 aa12.6□□□□□ -0.39
RNF40-211ENST00000567365 BTBD1Q9H0C5 482 aa12.6□□□□□ -0.39
RNF40-211ENST00000567365 SGK2Q9HBY8 427 aa12.6□□□□□ -0.39
RNF40-211ENST00000567365 PARD6AQ9NPB6 346 aa12.6□□□□□ -0.39
RNF40-211ENST00000567365 RALGAPA1Q6GYQ0 2036 aa12.6□□□□□ -0.39
RNF40-211ENST00000567365 ANKRD36A6QL64 1941 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 CCDC66A2RUB6 948 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 METTL12A8MUP2 240 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 C1QTNF3-AMACRE9PGA6 284 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 PLK4O00444 970 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 DDX3YO15523 660 aaKnown RBP12.59□□□□□ -0.39
RNF40-211ENST00000567365 SLC7A4O43246 635 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 SPINT1O43278 529 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 BNIP3LO60238 219 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 LRP3O75074 770 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 POP4O95707 220 aaKnown RBP12.59□□□□□ -0.39
RNF40-211ENST00000567365 SEMA4FO95754 770 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 IGHV4-34P06331 123 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 CCDC175P0C221 793 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 KRT10P13645 584 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 TNNT1P13805 278 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 ITGB7P26010 798 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 ADPRHP54922 357 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 COPS2P61201 443 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 ZNF33AQ06730 810 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 SFSWAPQ12872 951 aaKnown RBP12.59□□□□□ -0.39
RNF40-211ENST00000567365 HNRNPDQ14103 355 aaKnown RBP12.59□□□□□ -0.39
RNF40-211ENST00000567365 LBRQ14739 615 aaKnown RBP12.59□□□□□ -0.39
RNF40-211ENST00000567365 TMCO4Q5TGY1 634 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 ALG1LQ6GMV1 187 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 KIAA2013Q8IYS2 634 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 ATPAF2Q8N5M1 289 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 OR6K2Q8NGY2 324 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 UBE2Q2Q8WVN8 375 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 SPOCK2Q92563 424 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 HES6Q96HZ4 224 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 EXOC2Q96KP1 924 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 GDAP1L1Q96MZ0 367 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 MGME1Q9BQP7 344 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 C6orf106Q9H6K1 298 aaPredicted RBP12.59□□□□□ -0.39
RNF40-211ENST00000567365 SP110Q9HB58 689 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 SEPT3Q9UH03 358 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 EVLQ9UI08 416 aaPredicted RBP12.59□□□□□ -0.39
RNF40-211ENST00000567365 PILRBQ9UKJ0 227 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 RAB23Q9ULC3 237 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 EFR3BQ9Y2G0 817 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 PPP2R2CQ9Y2T4 447 aa12.59□□□□□ -0.39
RNF40-211ENST00000567365 FARP1Q9Y4F1 1045 aaPredicted RBP12.59□□□□□ -0.39
RNF40-211ENST00000567365 DOCK9Q9BZ29 2069 aa12.58□□□□□ -0.39
RNF40-211ENST00000567365 PCDH15Q96QU1 1955 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 TSPAN11A1L157 253 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 MATN3O15232 486 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 LATO43561 262 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 PLRG1O43660 514 aaKnown RBP12.58□□□□□ -0.4
RNF40-211ENST00000567365 KRT86O43790 486 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 GJB3O75712 270 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 RNASEH2AO75792 299 aaKnown RBP12.58□□□□□ -0.4
RNF40-211ENST00000567365 IGSF6O95976 241 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 PECAM1P16284 738 aaPredicted RBP12.58□□□□□ -0.4
RNF40-211ENST00000567365 ZFXP17010 805 aaPredicted RBP12.58□□□□□ -0.4
RNF40-211ENST00000567365 ITPKAP23677 461 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 CCNCP24863 283 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 RECQLP46063 649 aaPredicted RBP12.58□□□□□ -0.4
RNF40-211ENST00000567365 DNA2P51530 1060 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 RHOAP61586 193 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 PPIDQ08752 370 aaKnown RBP12.58□□□□□ -0.4
RNF40-211ENST00000567365 TFDP2Q14188 446 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 IHHQ14623 411 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 TFDP3Q5H9I0 405 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 ZFYVE27Q5T4F4 411 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 DCAF12L1Q5VU92 463 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 NPNTQ6UXI9 565 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 FAM124AQ86V42 546 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 SYCE1Q8N0S2 351 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 OR2T34Q8NGX1 318 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 GRIN3AQ8TCU5 1115 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 RBM41Q96IZ5 413 aaKnown RBP12.58□□□□□ -0.4
RNF40-211ENST00000567365 HSPA12BQ96MM6 686 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 OSBPL1AQ9BXW6 950 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 ARRDC1-AS1Q9H2J1 176 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 KDM4CQ9H3R0 1056 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 ZDHHC6Q9H6R6 413 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 TMEM74BQ9NUR3 256 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 DKK3Q9UBP4 350 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 AMFRQ9UKV5 643 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 NCKAP1Q9Y2A7 1128 aa12.58□□□□□ -0.4
RNF40-211ENST00000567365 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.58□□□□□ -0.4
RNF40-211ENST00000567365 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.58□□□□□ -0.4
RNF40-211ENST00000567365 KNL1Q8NG31 2342 aa12.57□□□□□ -0.4
RNF40-211ENST00000567365 SPTBN4Q9H254 2564 aa12.57□□□□□ -0.4
RNF40-211ENST00000567365 MIF4GDA9UHW6 222 aaKnown RBP12.57□□□□□ -0.4
RNF40-211ENST00000567365 KPNA3O00505 521 aaPredicted RBP12.57□□□□□ -0.4
RNF40-211ENST00000567365 KRIT1O00522 736 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms