RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 UBQLN1Q9UMX0 589 aaKnown RBP6.32□□□□□ -1.4
CLK3-212ENST00000563418 IL1BP01584 269 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 PGRP06401 933 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 TUBP50607 506 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 MAZP56270 477 aaKnown RBP6.32□□□□□ -1.4
CLK3-212ENST00000563418 STILQ15468 1287 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 SPANXN3Q5MJ09 141 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 PGAP1Q75T13 922 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 RYBPQ8N488 228 aaPredicted RBP6.32□□□□□ -1.4
CLK3-212ENST00000563418 S100PBPQ96BU1 408 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 IFT22Q9H7X7 185 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 PAK6Q9NQU5 681 aaPredicted RBP6.32□□□□□ -1.4
CLK3-212ENST00000563418 ACOT9Q9Y305 439 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 CEP170BQ9Y4F5 1589 aaPredicted RBP6.32□□□□□ -1.4
CLK3-212ENST00000563418 PP2D1A8MPX8 630 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 BCKDKO14874 412 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 AQP9O43315 295 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 CLUP10909 449 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 STOMP27105 288 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 STT3AP46977 705 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 NFIAQ12857 509 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 CASP12Q6UXS9 341 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 HIPK1Q86Z02 1210 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 SDR42E1Q8WUS8 393 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 AP2M1Q96CW1 435 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 TCEAL4Q96EI5 215 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 MCEEQ96PE7 176 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 PPP1R10Q96QC0 940 aaKnown RBP6.32□□□□□ -1.4
CLK3-212ENST00000563418 SLC30A2Q9BRI3 323 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 RPS6KA6Q9UK32 745 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 MRPS7Q9Y2R9 242 aaKnown RBP6.32□□□□□ -1.4
CLK3-212ENST00000563418 MED24O75448 989 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 OR6B1O95007 311 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 GSTM2P28161 218 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 HSD17B4P51659 736 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 FAAP100Q0VG06 881 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 RCN3Q96D15 328 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 APOL5Q9BWW9 433 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 SLC39A10Q9ULF5 831 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 MAFFQ9ULX9 164 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 ADGRB3O60242 1522 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 A0A1W2PPW3 197 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 LRIG2O94898 1065 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 SERPINF2P08697 491 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 ALDH1B1P30837 517 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 HIBADHP31937 336 aaKnown RBP6.32□□□□□ -1.4
CLK3-212ENST00000563418 RAB39AQ14964 217 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 UGT2A3Q6UWM9 527 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 PIWIL4Q7Z3Z4 852 aaKnown RBP6.32□□□□□ -1.4
CLK3-212ENST00000563418 SLC51BQ86UW2 128 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 TEKT5Q96M29 485 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 PCIF1Q9H4Z3 704 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 LRRC40Q9H9A6 602 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 CLN6Q9NWW5 311 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 C3orf70A6NLC5 250 aaPredicted RBP6.32□□□□□ -1.4
CLK3-212ENST00000563418 KBTBD13C9JR72 458 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 M0R233 179 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 AP1G1O43747 822 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 PCSK2P16519 638 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 PPP5CP53041 499 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 CYP1B1Q16678 543 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 BTBD16Q32M84 506 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 TCEAL6Q6IPX3 200 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 ZNF425Q6IV72 752 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 ISLR2Q6UXK2 745 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 BANPQ8N9N5 519 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 OR5J2Q8NH18 312 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 TBC1D15Q8TC07 691 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 CTRCQ99895 268 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 COQ10BQ9H8M1 238 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 ZNF334Q9HCZ1 680 aaPredicted RBP6.32□□□□□ -1.4
CLK3-212ENST00000563418 PCDHGB3Q9Y5G1 929 aa6.32□□□□□ -1.4
CLK3-212ENST00000563418 PRAMEF33A0A0G2JMD5 474 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 ZNF263O14978 683 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 PRAMEF10O60809 474 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 REM1O75628 298 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 RNASEH2AO75792 299 aaKnown RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 OR2B3O76000 313 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 TFPTP0C1Z6 253 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 GLRA2P23416 452 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 FAUP35544 74 aaKnown RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 PIK3CGP48736 1102 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 JAK3P52333 1124 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 LSM3P62310 102 aaKnown RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 DEFA5Q01523 94 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 C1QBPQ07021 282 aaKnown RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 NDUFAF6Q330K2 333 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 CDKL4Q5MAI5 379 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 NAPEPLDQ6IQ20 393 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 XKR5Q6UX68 686 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 SPOCD1Q6ZMY3 1216 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 UBR7Q8N806 425 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 CDYL2Q8N8U2 506 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 HOXB8P17481 243 aaPredicted RBP6.31□□□□□ -1.4
CLK3-212ENST00000563418 SLC39A6Q13433 755 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 GTF2H3Q13889 308 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 GALEQ14376 348 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 SLX4IPQ5VYV7 408 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 RACGAP1Q9H0H5 632 aa6.31□□□□□ -1.4
CLK3-212ENST00000563418 USP29Q9HBJ7 922 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms