RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 CHRNA9Q9UGM1 479 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 GABRQQ9UN88 632 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 CDC14AQ9UNH5 594 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 HRH3Q9Y5N1 445 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 NAIPQ13075 1403 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 SAMD9Q5K651 1589 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 KDM5AP29375 1690 aaKnown RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 NKTRP30414 1462 aaKnown RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 A0A1B0GUA9 196 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 OR6C75A6NL08 312 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 GOLGA8RI6L899 631 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 TNFSF14O43557 240 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 CIB2O75838 187 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 SERPINA3P01011 423 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 PRELPP51888 382 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 BCL7AQ4VC05 210 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 PAN2Q504Q3 1202 aaKnown RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 HERC4Q5GLZ8 1057 aaPredicted RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 RAB41Q5JT25 222 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 WIPI1Q5MNZ9 446 aaPredicted RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 TIGD7Q6NT04 549 aaPredicted RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 TTI2Q6NXR4 508 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 ZNF365Q70YC5 407 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 EFL1Q7Z2Z2 1120 aaKnown RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 AKAP14Q86UN6 197 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 DHX40Q8IX18 779 aaKnown RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 CADM3Q8N126 398 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 BHLHE23Q8NDY6 225 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 BBS1Q8NFJ9 593 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 SMARCC2Q8TAQ2 1214 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 CAGE1Q8TC20 777 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 RFKQ969G6 155 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 SNX27Q96L92 541 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 SNX22Q96L94 193 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 WDFY2Q96P53 400 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 POP1Q99575 1024 aaKnown RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 CINPQ9BW66 212 aaPredicted RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 WDR11Q9BZH6 1224 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 ZNF552Q9H707 407 aaPredicted RBP4.86□□□□□ -1.63
SMG1-207ENST00000563235 PNPOQ9NVS9 261 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 PCDHB2Q9Y5E7 798 aa4.86□□□□□ -1.63
SMG1-207ENST00000563235 ADCY9O60503 1353 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 COL15A1P39059 1388 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 A0A0A6YYC8 382 aaPredicted RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 A0A1B0GTQ1 180 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 OR2AG2A6NM03 316 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 I3L1I5 382 aaPredicted RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 SHOXO15266 292 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 OGTO15294 1046 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 KLK10O43240 276 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 CYTH3O43739 400 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 LILRA1O75019 489 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 CDC123O75794 336 aaPredicted RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 PCCBP05166 539 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 UROSP10746 265 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 CCDC130P13994 396 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 CPB1P15086 417 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 TCN1P20061 433 aaPredicted RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 CORO1AP31146 461 aaKnown RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 LSP1P33241 339 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 ALDH7A1P49419 539 aaKnown RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 SMSP52788 366 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 PPARAQ07869 468 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 NCBP1Q09161 790 aaKnown RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 PCLAFQ15004 111 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 TAF1BQ53T94 588 aaPredicted RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 Q5PR19 223 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 C18orf63Q68DL7 685 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 TUBA3EQ6PEY2 450 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 TRILQ7L0X0 811 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 NLRP9Q7RTR0 991 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 MIER3Q7Z3K6 550 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 CCDC25Q86WR0 208 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 LDHDQ86WU2 507 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 ULK2Q8IYT8 1036 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 ZNF511Q8NB15 262 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 ACSBG1Q96GR2 724 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 TRAPPC9Q96Q05 1148 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 GAL3ST4Q96RP7 486 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 CYTH2Q99418 400 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 MLPHQ9BV36 600 aaPredicted RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 TLR10Q9BXR5 811 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 USP26Q9BXU7 913 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 TMEM8AQ9HCN3 771 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 ZDHHC18Q9NUE0 388 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 TAS2R10Q9NYW0 307 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 CBLCQ9ULV8 474 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 AP4E1Q9UPM8 1137 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 AP4B1Q9Y6B7 739 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 TMEM120BA0PK00 339 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 FAM170BA6NMN3 283 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 C1QTNF9BB2RNN3 333 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 H3BUI4 141 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 DNPH1O43598 174 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 NDUFS6O75380 124 aaKnown RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 MED24O75448 989 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 PGLSO95336 258 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 LGI1O95970 557 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 CHEK2O96017 543 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 MT-ATP6P00846 226 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms