RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 ZDHHC18Q9NUE0 388 aa22.83■■□□□ 1.25
SYNGR3-202ENST00000562045 IPO11Q9UI26 975 aaKnown RBP22.83■■□□□ 1.25
SYNGR3-202ENST00000562045 VPS28Q9UK41 221 aa22.83■■□□□ 1.25
SYNGR3-202ENST00000562045 TPX2Q9ULW0 747 aaKnown RBP22.83■■□□□ 1.25
SYNGR3-202ENST00000562045 STON1Q9Y6Q2 735 aa22.83■■□□□ 1.25
SYNGR3-202ENST00000562045 CKAP5Q14008 2032 aa22.83■■□□□ 1.24
SYNGR3-202ENST00000562045 K7ESF4 209 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 DLDP09622 509 aaKnown RBP22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 HLA-EP13747 358 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 PRKCHP24723 683 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 CLCN6P51797 869 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ITGA8P53708 1063 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 GNA12Q03113 381 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 DMWDQ09019 674 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 WASHC5Q12768 1159 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 SLC12A1Q13621 1099 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 DMC1Q14565 340 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ANKRD20A2Q5SQ80 823 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ANKRD20A1Q5TYW2 823 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ANKRD20A3Q5VUR7 823 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 KIAA1211LQ6NV74 962 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 EMBQ6PCB8 327 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ZDHHC24Q6UX98 284 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ARHGAP36Q6ZRI8 547 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ARHGEF18Q6ZSZ5 1173 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 SYT13Q7L8C5 426 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ZNF354CQ86Y25 554 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 FBXO25Q8TCJ0 367 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 PRMT8Q9NR22 394 aaPredicted RBP22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 MTRF1LQ9UGC7 380 aaKnown RBP22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 SLCO3A1Q9UIG8 710 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ANAPC5Q9UJX4 755 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ACTL7AQ9Y615 435 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 A0A1W2PQF6 199 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ILVBLA1L0T0 632 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 MATN3O15232 486 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 GALR2O43603 387 aaPredicted RBP22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 TIMM44O43615 452 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 PTPN3P26045 913 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 NTSR1P30989 418 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ETFBP38117 255 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 CXCL12P48061 93 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 SERINC3Q13530 473 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ENPP2Q13822 863 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ZNF783Q6ZMS7 281 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 MAMSTRQ6ZN01 415 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 PRSS33Q8NF86 280 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 KCNV2Q8TDN2 545 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 AENQ8WTP8 325 aaKnown RBP22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ARHGEF2Q92974 986 aaKnown RBP22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 FATE1Q969F0 183 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 HHIPQ96QV1 700 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 FMO2Q99518 471 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 NEUROG2Q9H2A3 272 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 CD248Q9HCU0 757 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ARFGAP3Q9NP61 516 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 TRHDEQ9UKU6 1024 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 ERVW-1Q9UQF0 538 aa22.82■■□□□ 1.24
SYNGR3-202ENST00000562045 LAMTOR5O43504 91 aa22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 TDGF1P13385 188 aa22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 PXNP49023 591 aaPredicted RBP22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 BASP1P80723 227 aaKnown RBP22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 MORF4L2Q15014 288 aa22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 ANGPT1Q15389 498 aa22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 CRY1Q16526 586 aa22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 UCMAQ8WVF2 138 aa22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 GABRG3Q99928 467 aa22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 IER2Q9BTL4 223 aa22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 SPON2Q9BUD6 331 aa22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 TMEM245Q9H330 911 aa22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 SP110Q9HB58 689 aa22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 KLHL8Q9P2G9 620 aaPredicted RBP22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 RAPGEFL1Q9UHV5 662 aa22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 VPS51Q9UID3 782 aa22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 EML5Q05BV3 1969 aa22.81■■□□□ 1.24
SYNGR3-202ENST00000562045 SMAPO00193 183 aa22.8■■□□□ 1.24
SYNGR3-202ENST00000562045 ATG13O75143 517 aa22.8■■□□□ 1.24
SYNGR3-202ENST00000562045 MT-CO1P00395 513 aa22.8■■□□□ 1.24
SYNGR3-202ENST00000562045 ATP5BP06576 529 aaKnown RBP22.8■■□□□ 1.24
SYNGR3-202ENST00000562045 CCR3P51677 355 aa22.8■■□□□ 1.24
SYNGR3-202ENST00000562045 IFI35P80217 286 aaPredicted RBP22.8■■□□□ 1.24
SYNGR3-202ENST00000562045 ECT2LQ008S8 904 aa22.8■■□□□ 1.24
SYNGR3-202ENST00000562045 FNDC3BQ53EP0 1204 aaKnown RBP22.8■■□□□ 1.24
SYNGR3-202ENST00000562045 TEX44Q53QW1 395 aa22.8■■□□□ 1.24
SYNGR3-202ENST00000562045 HIBCHQ6NVY1 386 aaPredicted RBP22.8■■□□□ 1.24
SYNGR3-202ENST00000562045 LINGO4Q6UY18 593 aa22.8■■□□□ 1.24
SYNGR3-202ENST00000562045 PPIL6Q8IXY8 311 aa22.8■■□□□ 1.24
SYNGR3-202ENST00000562045 ZNF567Q8N184 647 aa22.8■■□□□ 1.24
SYNGR3-202ENST00000562045 ACDQ96AP0 544 aa22.8■■□□□ 1.24
SYNGR3-202ENST00000562045 RAB6BQ9NRW1 208 aa22.8■■□□□ 1.24
SYNGR3-202ENST00000562045 SHOC2Q9UQ13 582 aa22.8■■□□□ 1.24
SYNGR3-202ENST00000562045 TP73O15350 636 aa22.79■■□□□ 1.24
SYNGR3-202ENST00000562045 ZMPSTE24O75844 475 aa22.79■■□□□ 1.24
SYNGR3-202ENST00000562045 CCNB1P14635 433 aa22.79■■□□□ 1.24
SYNGR3-202ENST00000562045 HOXB2P14652 356 aa22.79■■□□□ 1.24
SYNGR3-202ENST00000562045 OXCT1P55809 520 aa22.79■■□□□ 1.24
SYNGR3-202ENST00000562045 CSTF1Q05048 431 aaKnown RBP22.79■■□□□ 1.24
SYNGR3-202ENST00000562045 IL10RBQ08334 325 aa22.79■■□□□ 1.24
SYNGR3-202ENST00000562045 ZBTB17Q13105 803 aa22.79■■□□□ 1.24
SYNGR3-202ENST00000562045 RNASEH2BQ5TBB1 312 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms