RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CCDC77Q9BR77 488 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 CAPS2Q9BXY5 557 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 STMN4Q9H169 189 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 VPS37BQ9H9H4 285 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 PDFQ9HBH1 243 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 ATP13A1Q9HD20 1204 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 GKN1Q9NS71 199 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 KLHL8Q9P2G9 620 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 ZC3H7BQ9UGR2 993 aaKnown RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 IPO11Q9UI26 975 aaKnown RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 MSRAQ9UJ68 235 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 AGO1Q9UL18 857 aaKnown RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 SSX2IPQ9Y2D8 614 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 ASB3Q9Y575 518 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 PCDHA11Q9Y5I1 949 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 CHD7Q9P2D1 2997 aa6.65□□□□□ -1.35
CAPN3-210ENST00000561817 LAMA2P24043 3122 aaKnown RBP6.65□□□□□ -1.35
CAPN3-210ENST00000561817 DOCK6Q96HP0 2047 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-210ENST00000561817 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-210ENST00000561817 A0A1W2PPM1 405 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 HMX2A2RU54 273 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 ARHGAP42A6NI28 874 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 SDR42E2A6NKP2 422 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 A6NNZ2 444 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 POC1B-GALNT4F8VUJ3 575 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 PRRG1O14668 218 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 TYROBPO43914 113 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 UGT1A9O60656 530 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 PRMT3O60678 531 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 PRAMEF11O60813 436 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 MOSPD3O75425 235 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 PAPLNO95428 1278 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 LATS1O95835 1130 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 C1RP00736 705 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 CA3P07451 260 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 FBXO45P0C2W1 286 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 SPATA31D3P0C874 917 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 MGAT1P26572 445 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 CORO1AP31146 461 aaKnown RBP6.64□□□□□ -1.35
CAPN3-210ENST00000561817 LSP1P33241 339 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 CA8P35219 290 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 PHBP35232 272 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 ACVRL1P37023 503 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 CLCN4P51793 760 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 SLC18A1P54219 525 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 EPHB3P54753 998 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 EPHA5P54756 1037 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 YBEYP58557 167 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-210ENST00000561817 GNGT1P63211 74 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 CRADDP78560 199 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 SLC7A9P82251 487 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 NIPAL4Q0D2K0 466 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 HNRNPDQ14103 355 aaKnown RBP6.64□□□□□ -1.35
CAPN3-210ENST00000561817 VEPH1Q14D04 833 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 RAB30Q15771 203 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 KLHL38Q2WGJ6 581 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 TUBB8Q3ZCM7 444 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 KBTBD12Q3ZCT8 623 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 PARP15Q460N3 678 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 TTC19Q6DKK2 380 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-210ENST00000561817 ALG1LQ6GMV1 187 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 ITPRIPL1Q6GPH6 555 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 CXorf57Q6NSI4 855 aaKnown RBP6.64□□□□□ -1.35
CAPN3-210ENST00000561817 TIGD7Q6NT04 549 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-210ENST00000561817 ZNF449Q6P9G9 518 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 RFWD3Q6PCD5 774 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 SPATA31D4Q6ZUB0 917 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 TMEM135Q86UB9 458 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 CHSY1Q86X52 802 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 LGI2Q8N0V4 545 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 MICALL1Q8N3F8 863 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 PGBD5Q8N414 524 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 KREMEN2Q8NCW0 462 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 OR52K1Q8NGK4 314 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 SPATA22Q8NHS9 363 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 ARRDC2Q8TBH0 407 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 USP33Q8TEY7 942 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 SLC22A17Q8WUG5 538 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 PPM1EQ8WY54 764 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 TIFAQ96CG3 184 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 STAMBPL1Q96FJ0 436 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 IMP4Q96G21 291 aaKnown RBP6.64□□□□□ -1.35
CAPN3-210ENST00000561817 CFAP36Q96G28 342 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 NSMCE3Q96MG7 304 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 RPRD1AQ96P16 312 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-210ENST00000561817 FCRL3Q96P31 734 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-210ENST00000561817 CYP2S1Q96SQ9 504 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 CYTH2Q99418 400 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 PAFAH2Q99487 392 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 FERMT1Q9BQL6 677 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 PBX4Q9BYU1 374 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 SLC25A51Q9H1U9 297 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 CCDC134Q9H6E4 229 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 CNOT10Q9H9A5 744 aaKnown RBP6.64□□□□□ -1.35
CAPN3-210ENST00000561817 UGT1A7Q9HAW7 530 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 UGT1A10Q9HAW8 530 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 UGT1A8Q9HAW9 530 aa6.64□□□□□ -1.35
CAPN3-210ENST00000561817 RBM22Q9NW64 420 aaKnown RBP eCLIP6.64□□□□□ -1.35
CAPN3-210ENST00000561817 SYBUQ9NX95 663 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms