RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 CA14Q9ULX7 337 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 SNX24Q9Y343 169 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 TTLL3Q9Y4R7 772 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 SHISA7A6NL88 538 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 EIF3HO15372 352 aaKnown RBP eCLIP12.58□□□□□ -0.4
TPM1-209ENST00000558072 INSIG1O15503 277 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 PPFIA2O75334 1257 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 HLA-DQB2P05538 268 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 APRTP07741 180 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 MLNP12872 115 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 SRCP12931 536 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 CD72P21854 359 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 VPS41P49754 854 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 GALK1P51570 392 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 RPL26P61254 145 aaKnown RBP12.58□□□□□ -0.4
TPM1-209ENST00000558072 MRPS21P82921 87 aaKnown RBP12.58□□□□□ -0.4
TPM1-209ENST00000558072 CCDC15Q0P6D6 951 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 SFSWAPQ12872 951 aaKnown RBP12.58□□□□□ -0.4
TPM1-209ENST00000558072 BRD3Q15059 726 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 CYTH1Q15438 398 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 TRIP13Q15645 432 aaPredicted RBP12.58□□□□□ -0.4
TPM1-209ENST00000558072 ACCSLQ4AC99 568 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 FNDC3BQ53EP0 1204 aaKnown RBP12.58□□□□□ -0.4
TPM1-209ENST00000558072 SLC44A4Q53GD3 710 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 DNAJC21Q5F1R6 531 aaKnown RBP12.58□□□□□ -0.4
TPM1-209ENST00000558072 ZNF852Q6ZMS4 543 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 KLHDC8BQ8IXV7 354 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 PDIK1LQ8N165 341 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 SYNPOQ8N3V7 929 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 OR2AP1Q8NGE2 309 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 USP33Q8TEY7 942 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 IFT81Q8WYA0 676 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 ART4Q93070 314 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 ERLEC1Q96DZ1 483 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 IMP4Q96G21 291 aaKnown RBP12.58□□□□□ -0.4
TPM1-209ENST00000558072 TRIM51Q9BSJ1 452 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 FSD1LQ9BXM9 530 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 OSBPL1AQ9BXW6 950 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 ADGRE3Q9BY15 652 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 CPEB1Q9BZB8 566 aaKnown RBP12.58□□□□□ -0.4
TPM1-209ENST00000558072 TRIM31Q9BZY9 425 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 ATP13A3Q9H7F0 1226 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 C10orf88Q9H8K7 445 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 ETNK1Q9HBU6 452 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 DMGDHQ9UI17 866 aaKnown RBP12.58□□□□□ -0.4
TPM1-209ENST00000558072 RPL26L1Q9UNX3 145 aaKnown RBP12.58□□□□□ -0.4
TPM1-209ENST00000558072 ACTL7AQ9Y615 435 aa12.58□□□□□ -0.4
TPM1-209ENST00000558072 EDDM13A0A1B0GTR0 161 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 BHMG1C9JSJ3 638 aaPredicted RBP12.57□□□□□ -0.4
TPM1-209ENST00000558072 ALOX15BO15296 676 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 SOCS5O75159 536 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 SUN1O94901 812 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 AP2A1O95782 977 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 ZSCAN5DPP0CG00 497 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 NFKB1P19838 968 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 PSMB4P28070 264 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 RPL21P46778 160 aaKnown RBP12.57□□□□□ -0.4
TPM1-209ENST00000558072 SCNN1BP51168 640 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 ITGA8P53708 1063 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 PLTPP55058 493 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 ARL4CP56559 192 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 POLR2LP62875 67 aaKnown RBP12.57□□□□□ -0.4
TPM1-209ENST00000558072 LRRC32Q14392 662 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 SLMAPQ14BN4 828 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 DLG2Q15700 870 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 MLF2Q15773 248 aaPredicted RBP12.57□□□□□ -0.4
TPM1-209ENST00000558072 CARD16Q5EG05 197 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 TMEM196Q5HYL7 178 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 DGKKQ5KSL6 1271 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 RNASEH2BQ5TBB1 312 aaKnown RBP12.57□□□□□ -0.4
TPM1-209ENST00000558072 HIBCHQ6NVY1 386 aaPredicted RBP12.57□□□□□ -0.4
TPM1-209ENST00000558072 C22orf39Q6P5X5 142 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 LINGO4Q6UY18 593 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 LEKR1Q6ZMV7 388 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 SRLQ86TD4 932 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 CCNJLQ8IV13 435 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 GJD3Q8N144 294 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 PHTF2Q8N3S3 785 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 CNTD1Q8N815 330 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 TSEN2Q8NCE0 465 aaKnown RBP12.57□□□□□ -0.4
TPM1-209ENST00000558072 HCAR2Q8TDS4 363 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 FAM3CQ92520 227 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 LRRC39Q96DD0 335 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 IFT43Q96FT9 208 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 ZNF641Q96N77 438 aaPredicted RBP12.57□□□□□ -0.4
TPM1-209ENST00000558072 FMO2Q99518 471 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 SEMA3CQ99985 751 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 NAT9Q9BTE0 207 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 DPH5Q9H2P9 285 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 ANKZF1Q9H8Y5 726 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 FBRSL1Q9HCM7 1045 aaKnown RBP12.57□□□□□ -0.4
TPM1-209ENST00000558072 THAP10Q9P2Z0 257 aaPredicted RBP12.57□□□□□ -0.4
TPM1-209ENST00000558072 RAB21Q9UL25 225 aa12.57□□□□□ -0.4
TPM1-209ENST00000558072 MAGEB16A2A368 324 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 CCDC151A5D8V7 595 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 WASH3PC4AMC7 463 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 RNASEH1O60930 286 aaKnown RBP12.56□□□□□ -0.4
TPM1-209ENST00000558072 METTL18O95568 372 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 PRNPP04156 253 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 ETS1P14921 441 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms