RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 KNTC1P50748 2209 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 C16orf96A6NNT2 1141 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 KRIT1O00522 736 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 TRIM38O00635 465 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 CD160O95971 181 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 ALPPL2P10696 532 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 DGKAP23743 735 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 COL28A1Q2UY09 1125 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 ZNF805Q5CZA5 627 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 SCYL2Q6P3W7 929 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 WDR59Q6PJI9 974 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 KYAT3Q6YP21 454 aaKnown RBP14.88□□□□□ -0.03
SHMT2-235ENST00000557740 LEKR1Q6ZMV7 388 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 Q6ZSR6 202 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 MON1BQ7L1V2 547 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 SLFN11Q7Z7L1 901 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 DCP2Q8IU60 420 aaKnown RBP14.88□□□□□ -0.03
SHMT2-235ENST00000557740 OR2AP1Q8NGE2 309 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 OR4C6Q8NH72 309 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 HNRNPLLQ8WVV9 542 aaKnown RBP14.88□□□□□ -0.03
SHMT2-235ENST00000557740 RAB7BQ96AH8 199 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 LRIG1Q96JA1 1093 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 MCEEQ96PE7 176 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 ERGIC2Q96RQ1 377 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 SLC17A9Q9BYT1 436 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 UCKL1Q9NWZ5 548 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 DNAJC28Q9NX36 388 aa14.88□□□□□ -0.03
SHMT2-235ENST00000557740 ZSCAN5CA6NGD5 496 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-235ENST00000557740 SIGLEC16A6NMB1 481 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 CCP110O43303 1012 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 TSPAN6O43657 245 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 BUB1O43683 1085 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 PIAS2O75928 621 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 POP4O95707 220 aaKnown RBP14.87□□□□□ -0.03
SHMT2-235ENST00000557740 UGT2B4P06133 528 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 CCDC172P0C7W6 258 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 ACP1P24666 158 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 EPHB2P29323 1055 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 GKP32189 559 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 ZNF143P52747 638 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-235ENST00000557740 C1QBPQ07021 282 aaKnown RBP14.87□□□□□ -0.03
SHMT2-235ENST00000557740 TARDBPQ13148 414 aaKnown RBP eCLIP14.87□□□□□ -0.03
SHMT2-235ENST00000557740 SLC22A18ASQ8N1D0 253 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 SLC25A45Q8N413 288 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 RTL3Q8N8U3 475 aaKnown RBP14.87□□□□□ -0.03
SHMT2-235ENST00000557740 ARHGEF26Q96DR7 871 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 IFT43Q96FT9 208 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 GDAP1L1Q96MZ0 367 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 EPAS1Q99814 870 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 AGPAT1Q99943 283 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 OSBPL1AQ9BXW6 950 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 MAGEB5Q9BZ81 275 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 SCUBE2Q9NQ36 999 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 IPO11Q9UI26 975 aaKnown RBP14.87□□□□□ -0.03
SHMT2-235ENST00000557740 HS3ST3A1Q9Y663 406 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 AK5Q9Y6K8 562 aa14.87□□□□□ -0.03
SHMT2-235ENST00000557740 DOCK4Q8N1I0 1966 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 NEMP2A6NFY4 417 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 IGLON5A6NGN9 336 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 H3BM21 787 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 FPGTO14772 594 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 KDELR3O43731 214 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 CREB3O43889 395 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 TMCC1O94876 653 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 PAK4O96013 591 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-235ENST00000557740 FERP16591 822 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 ABL2P42684 1182 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 RABIFP47224 123 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 HNRNPKP61978 463 aaKnown RBP eCLIP14.86□□□□□ -0.03
SHMT2-235ENST00000557740 RAD51Q06609 339 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 FGL2Q14314 439 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 MYLK3Q32MK0 819 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 CCDC183Q5T5S1 534 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 ATXN7L2Q5T6C5 722 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-235ENST00000557740 DCUN1D2Q6PH85 259 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 PDZD3Q86UT5 571 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 PARGQ86W56 976 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 PYROXD2Q8N2H3 581 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 CASKIN2Q8WXE0 1202 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 DCBLD2Q96PD2 775 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 C1QTNF2Q9BXJ5 285 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 EVA1BQ9NVM1 165 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 NLGN3Q9NZ94 848 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 ITM2BQ9Y287 266 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 WDFY3Q8IZQ1 3526 aa14.86□□□□□ -0.03
SHMT2-235ENST00000557740 URB1O60287 2271 aaKnown RBP14.86□□□□□ -0.03
SHMT2-235ENST00000557740 POM121BA6NF01 834 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 RAD51BO15315 384 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 IGSF6O95976 241 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 MBD3O95983 291 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 AIF1P55008 147 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 RHOAP61586 193 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 E2F1Q01094 437 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 SEMG2Q02383 582 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 FZD2Q14332 565 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 ZNF542PQ5EBM4 170 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 TMC6Q7Z403 805 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 AOPEPQ8N6M6 819 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 DENND6BQ8NEG7 585 aa14.85□□□□□ -0.03
SHMT2-235ENST00000557740 RFFLQ8WZ73 363 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms