RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ICA1Q05084 483 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 NCAPH2Q6IBW4 605 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 RETSATQ6NUM9 610 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 TOGARAM2Q6ZUX3 1019 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 SYT13Q7L8C5 426 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 RFLNBQ8N5W9 214 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 ATOH1Q92858 354 aaPredicted RBP4.41□□□□□ -1.7
VRK1-207ENST00000557352 INPP4AQ96PE3 977 aaPredicted RBP4.41□□□□□ -1.7
VRK1-207ENST00000557352 PKP4Q99569 1192 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 MSTO1Q9BUK6 570 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 CXorf56Q9H5V9 222 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 GAREM1Q9H706 876 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 FBXO40Q9UH90 709 aa4.41□□□□□ -1.7
VRK1-207ENST00000557352 ERRFI1Q9UJM3 462 aaPredicted RBP4.41□□□□□ -1.7
VRK1-207ENST00000557352 A0A096LPK6 155 aa4.4□□□□□ -1.71
VRK1-207ENST00000557352 BUB3O43684 328 aa4.4□□□□□ -1.71
VRK1-207ENST00000557352 CBX6O95503 412 aa4.4□□□□□ -1.71
VRK1-207ENST00000557352 PNPLA4P41247 253 aa4.4□□□□□ -1.71
VRK1-207ENST00000557352 MTNR1AP48039 350 aa4.4□□□□□ -1.71
VRK1-207ENST00000557352 ADORA2A-AS1P86434 159 aa4.4□□□□□ -1.71
VRK1-207ENST00000557352 ILF3Q12906 894 aaKnown RBP eCLIP4.4□□□□□ -1.71
VRK1-207ENST00000557352 THOC5Q13769 683 aaKnown RBP4.4□□□□□ -1.71
VRK1-207ENST00000557352 SF3B4Q15427 424 aaKnown RBP eCLIP4.4□□□□□ -1.71
VRK1-207ENST00000557352 ZRSR1Q15695 479 aaKnown RBP4.4□□□□□ -1.71
VRK1-207ENST00000557352 SMAD1Q15797 465 aaKnown RBP4.4□□□□□ -1.71
VRK1-207ENST00000557352 AP5B1Q2VPB7 878 aa4.4□□□□□ -1.71
VRK1-207ENST00000557352 RUNDC3AQ59EK9 446 aa4.4□□□□□ -1.71
VRK1-207ENST00000557352 TANGO2Q6ICL3 276 aa4.4□□□□□ -1.71
VRK1-207ENST00000557352 MUC20Q8N307 709 aaPredicted RBP4.4□□□□□ -1.71
VRK1-207ENST00000557352 OR4N2Q8NGD1 307 aa4.4□□□□□ -1.71
VRK1-207ENST00000557352 ADGRG7Q96K78 797 aa4.4□□□□□ -1.71
VRK1-207ENST00000557352 CRB3Q9BUF7 120 aa4.4□□□□□ -1.71
VRK1-207ENST00000557352 CLK4Q9HAZ1 481 aaKnown RBP4.4□□□□□ -1.71
VRK1-207ENST00000557352 NLKQ9UBE8 527 aa4.4□□□□□ -1.71
VRK1-207ENST00000557352 IGLV5-37A0A075B6J1 123 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 A0A0B4J293 547 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 A0A0U1RQJ8 604 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 ABHD14A-ACY1A0A1B0GW23 586 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 DYTNA2CJ06 578 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 OR6C68A6NDL8 312 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 FAM157AC9JC47 383 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 E7EVH7 732 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 CHL1O00533 1208 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 METTL18O95568 372 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 F7P08709 466 aaPredicted RBP4.39□□□□□ -1.71
VRK1-207ENST00000557352 CSF1P09603 554 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 DCTDP32321 178 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 GJC1P36383 396 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 GPR12P47775 334 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 BYSLQ13895 437 aaKnown RBP4.39□□□□□ -1.71
VRK1-207ENST00000557352 TYW3Q6IPR3 259 aaKnown RBP4.39□□□□□ -1.71
VRK1-207ENST00000557352 GALNT15Q8N3T1 639 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 KTI12Q96EK9 354 aaPredicted RBP4.39□□□□□ -1.71
VRK1-207ENST00000557352 TAF1DQ9H5J8 278 aaPredicted RBP4.39□□□□□ -1.71
VRK1-207ENST00000557352 MVB12BQ9H7P6 319 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 WDR6Q9NNW5 1121 aaKnown RBP4.39□□□□□ -1.71
VRK1-207ENST00000557352 G6PC2Q9NQR9 355 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 BIVM-ERCC5R4GMW8 1640 aa4.39□□□□□ -1.71
VRK1-207ENST00000557352 HMX3A6NHT5 357 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 SEPT4O43236 478 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 KRT38O76015 456 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 IGLV2-11P01706 119 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 CSTBP04080 98 aaKnown RBP4.38□□□□□ -1.71
VRK1-207ENST00000557352 UMODP07911 640 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 TCEA1P23193 301 aaKnown RBP4.38□□□□□ -1.71
VRK1-207ENST00000557352 PTPN9P43378 593 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 HTR3AP46098 478 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 ARHGAP8P85298 464 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 FOXO1Q12778 655 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 MYBPHQ13203 477 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 IL13RA2Q14627 380 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 OTUD3Q5T2D3 398 aaPredicted RBP4.38□□□□□ -1.71
VRK1-207ENST00000557352 FOXP4Q8IVH2 680 aaPredicted RBP4.38□□□□□ -1.71
VRK1-207ENST00000557352 CACNA2D3Q8IZS8 1091 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 ZNF114Q8NC26 417 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 SETD9Q8NE22 299 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 OR6Y1Q8NGX8 325 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 CSGALNACT1Q8TDX6 532 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 TBC1D22AQ8WUA7 517 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 MORC2Q9Y6X9 1032 aaPredicted RBP4.38□□□□□ -1.71
VRK1-207ENST00000557352 LAMC3Q9Y6N6 1575 aa4.38□□□□□ -1.71
VRK1-207ENST00000557352 CFTRP13569 1480 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 TIMM23O14925 209 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 IL1AP01583 271 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 RBM5P52756 815 aaKnown RBP eCLIP4.37□□□□□ -1.71
VRK1-207ENST00000557352 PRKAA2P54646 552 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 CYP4A11Q02928 519 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 FAM27E3Q08E93 113 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 SNTA1Q13424 505 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 RPE65Q16518 533 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 XKR9Q5GH70 373 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 PGBD5Q8N414 524 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 MCPH1Q8NEM0 835 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 RASSF8Q8NHQ8 419 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 NCSTNQ92542 709 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 NODALQ96S42 347 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 TCF7L2Q9NQB0 619 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 TLR8Q9NR97 1041 aaKnown RBP4.37□□□□□ -1.71
VRK1-207ENST00000557352 ATP8A2Q9NTI2 1148 aa4.37□□□□□ -1.71
VRK1-207ENST00000557352 TMEM51Q9NW97 253 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms