RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PRICKLE2Q7Z3G6 844 aa12.11□□□□□ -0.47
ACTN1-221ENST00000556571 ZNF683Q8IZ20 524 aa12.11□□□□□ -0.47
ACTN1-221ENST00000556571 PCDH20Q8N6Y1 951 aaKnown RBP12.11□□□□□ -0.47
ACTN1-221ENST00000556571 DENND6BQ8NEG7 585 aa12.11□□□□□ -0.47
ACTN1-221ENST00000556571 C1orf74Q96LT6 269 aa12.11□□□□□ -0.47
ACTN1-221ENST00000556571 SPON2Q9BUD6 331 aa12.11□□□□□ -0.47
ACTN1-221ENST00000556571 FAM117AQ9C073 453 aa12.11□□□□□ -0.47
ACTN1-221ENST00000556571 PIGVQ9NUD9 493 aa12.11□□□□□ -0.47
ACTN1-221ENST00000556571 ATXN7L1Q9ULK2 861 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-221ENST00000556571 PCDHGC3Q9UN70 934 aa12.11□□□□□ -0.47
ACTN1-221ENST00000556571 PAXBP1Q9Y5B6 917 aa12.11□□□□□ -0.47
ACTN1-221ENST00000556571 HEMK1Q9Y5R4 338 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-221ENST00000556571 PMS2P1A4D2B8 440 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 IGLON5A6NGN9 336 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 LMO7DNF2Z398 122 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 GJB6O95452 261 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 F9P00740 461 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 ANXA6P08133 673 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
ACTN1-221ENST00000556571 USP8P40818 1118 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 SERPINH1P50454 418 aaKnown RBP12.1□□□□□ -0.47
ACTN1-221ENST00000556571 DNA2P51530 1060 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 THOP1P52888 689 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 ADKP55263 362 aaKnown RBP12.1□□□□□ -0.47
ACTN1-221ENST00000556571 MARSP56192 900 aaKnown RBP12.1□□□□□ -0.47
ACTN1-221ENST00000556571 PFN3P60673 137 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 SPIDRQ14159 915 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 DRAP1Q14919 205 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-221ENST00000556571 PRRT3Q5FWE3 981 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 TPRG1LQ5T0D9 272 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 C6orf132Q5T0Z8 1188 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 ISM2Q6H9L7 571 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 KLHL10Q6JEL2 608 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 ESRP1Q6NXG1 681 aaKnown RBP12.1□□□□□ -0.47
ACTN1-221ENST00000556571 TFAP2DQ7Z6R9 452 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 SLC35F3Q8IY50 421 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 ZNF397Q8NF99 534 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-221ENST00000556571 OR7D4Q8NG98 312 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 NELFBQ8WX92 580 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 RAB7BQ96AH8 199 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 LIN37Q96GY3 246 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-221ENST00000556571 TBATAQ96M53 351 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 TIGD1Q96MW7 591 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 NPY6RQ99463 290 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 SYNCQ9H7C4 482 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 ANLNQ9NQW6 1124 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 MPP6Q9NZW5 540 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 APOBEC3BQ9UH17 382 aaKnown RBP12.1□□□□□ -0.47
ACTN1-221ENST00000556571 IL17BQ9UHF5 180 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 STAP1Q9ULZ2 295 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 PADI4Q9UM07 663 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 PCDHGA7Q9Y5G6 932 aa12.1□□□□□ -0.47
ACTN1-221ENST00000556571 IGLV3-10A0A075B6K4 115 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 CXorf51AA0A1B0GTR3 108 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 BECN2A8MW95 431 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 TMX2-CTNND1H3BSU7 103 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 I6L893 689 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-221ENST00000556571 NTN3O00634 580 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-221ENST00000556571 NEMP1O14524 444 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 PLD2O14939 933 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 EFSO43281 561 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 GCATO75600 419 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 ZMPSTE24O75844 475 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 ERBB2P04626 1255 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 KRT10P13645 584 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 CCNHP51946 323 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-221ENST00000556571 PDX1P52945 283 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 NFATC3Q12968 1075 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 EIF3IQ13347 325 aaKnown RBP12.09□□□□□ -0.47
ACTN1-221ENST00000556571 C1orf61Q13536 156 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 OTUD1Q5VV17 481 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-221ENST00000556571 SMYD5Q6GMV2 418 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 PARS2Q7L3T8 475 aaKnown RBP12.09□□□□□ -0.47
ACTN1-221ENST00000556571 ZDHHC17Q8IUH5 632 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 PASD1Q8IV76 773 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 PLPP6Q8IY26 295 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 PHACTR4Q8IZ21 702 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 RBFAQ8N0V3 343 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 EXD3Q8N9H8 876 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 C1orf131Q8NDD1 294 aaKnown RBP12.09□□□□□ -0.47
ACTN1-221ENST00000556571 NT5C3BQ969T7 300 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 PGAP3Q96FM1 320 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-221ENST00000556571 CCDC3Q9BQI4 270 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 SLC13A1Q9BZW2 595 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 ATP13A1Q9HD20 1204 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.09□□□□□ -0.47
ACTN1-221ENST00000556571 HECAQ9UBI9 543 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-221ENST00000556571 SNX10Q9Y5X0 201 aa12.09□□□□□ -0.47
ACTN1-221ENST00000556571 KIF26BQ2KJY2 2108 aa12.08□□□□□ -0.47
ACTN1-221ENST00000556571 C16orf96A6NNT2 1141 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 PPP1R3GB7ZBB8 358 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 TOR1BO14657 336 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 YY2O15391 372 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 SRGAP2O75044 1071 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 ITGB2P05107 769 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 SLC5A2P31639 672 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 KRT9P35527 623 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 SULT1E1P49888 294 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 INHBCP55103 352 aa12.08□□□□□ -0.48
ACTN1-221ENST00000556571 YPEL5P62699 121 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms