RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 MAFAQ8NHW3 353 aaPredicted RBP10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 AENQ8WTP8 325 aaKnown RBP10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 CAVIN3Q969G5 261 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 ISG20Q96AZ6 181 aaKnown RBP10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 RPL10LQ96L21 214 aaKnown RBP10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 NUDCD1Q96RS6 583 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 RBM15Q96T37 977 aaKnown RBP eCLIP10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 MGME1Q9BQP7 344 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 PHACTR1Q9C0D0 580 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 UBP1Q9NZI7 540 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 BFARQ9NZS9 450 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 ERVW-1Q9UQF0 538 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 HS3ST2Q9Y278 367 aa10.61□□□□□ -0.71
TMEM55B-205ENST00000554028 NUP210Q8TEM1 1887 aaPredicted RBP10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 C2orf16Q68DN1 1984 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 INSIG1O15503 277 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 PMPCBO75439 489 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 SUN1O94901 812 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 MT-CO1P00395 513 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 MYBL2P10244 700 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 SRCP12931 536 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 GLULP15104 373 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 CSNK1DP48730 415 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 NPY2RP49146 381 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 VASPP50552 380 aaPredicted RBP10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 AP1S1P61966 158 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 DSC2Q02487 901 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 KDSRQ06136 332 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 CDH17Q12864 832 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 PDIA2Q13087 525 aaKnown RBP10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 GRM3Q14832 879 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 DLG2Q15700 870 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 SLC14A2Q15849 920 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 BBS9Q3SYG4 887 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 SYCP2LQ5T4T6 812 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 ANKRD22Q5VYY1 191 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 LRRC8BQ6P9F7 803 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 FBXO38Q6PIJ6 1188 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 TRMT10CQ7L0Y3 403 aaKnown RBP10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 SRLQ86TD4 932 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 RALGPS2Q86X27 583 aaPredicted RBP10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 PGBD5Q8N414 524 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 SH2D3CQ8N5H7 860 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 TERB1Q8NA31 727 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 KDM1BQ8NB78 822 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 SPATA22Q8NHS9 363 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 ANKRD7Q92527 254 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 DNASE1L2Q92874 299 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 LRRC39Q96DD0 335 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 GDAP1L1Q96MZ0 367 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 TTC25Q96NG3 672 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 P2RY13Q9BPV8 354 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 TBL1YQ9BQ87 522 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 ADGRE3Q9BY15 652 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 NEUROG2Q9H2A3 272 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 SAYSD1Q9NPB0 183 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 SAMD15Q9P1V8 674 aa10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 FCF1Q9Y324 198 aaKnown RBP10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 ARIH1Q9Y4X5 557 aaPredicted RBP10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 HELZP42694 1942 aaKnown RBP10.6□□□□□ -0.71
TMEM55B-205ENST00000554028 DOCK6Q96HP0 2047 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 TCRBV7S3A2A0A539 114 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 MAGEB16A2A368 324 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 OTOL1A6NHN0 477 aaPredicted RBP10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 SDR42E2A6NKP2 422 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 K7ERQ8 282 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 TRIM24O15164 1050 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 ATP9BO43861 1147 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 BNIP3LO60238 219 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 TMEM63AO94886 807 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 KAT7O95251 611 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 POP4O95707 220 aaKnown RBP10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 CD160O95971 181 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 MT-CYBP00156 380 aaPredicted RBP10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 GSRP00390 522 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 CPP00450 1065 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 EPOP01588 193 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 FAM153BP0C7A2 387 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 ECHS1P30084 290 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 OPRD1P41143 372 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 CTSOP43234 321 aaPredicted RBP10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 MAGEA4P43358 317 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 TNFRSF4P43489 277 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 PMS2P54278 862 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 WNT3AP56704 352 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 CDK18Q07002 472 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 BCL2L1Q07817 233 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 NIPAL4Q0D2K0 466 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 TDGQ13569 410 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 LAMB3Q13751 1172 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 SPARCL1Q14515 664 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 PCSK7Q16549 785 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 FAM153CQ494X1 144 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 FNDC3BQ53EP0 1204 aaKnown RBP10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 CARD16Q5EG05 197 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 BEND6Q5SZJ8 279 aaPredicted RBP10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 FAM182AQ5T1J6 154 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 CFAP58Q5T655 872 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 KCTD11Q693B1 232 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 ALG1LQ6GMV1 187 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms