RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 SNAP91O60641 907 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 RNASEH2AO75792 299 aaKnown RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 PROSCO94903 275 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 SRCP12931 536 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 C5AR1P21730 350 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 BCKDHBP21953 392 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 SLC8A1P32418 973 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 SERPINB6P35237 376 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 GJC1P36383 396 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 MPLP40238 635 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 ARHGAP25P42331 645 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 HCAR3P49019 387 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 SMCPP49901 116 aaPredicted RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 SERPINH1P50454 418 aaKnown RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 TPMTP51580 245 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 ARSDP51689 593 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 NDST2P52849 883 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 ATXN3P54252 364 aaPredicted RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 NAP1L1P55209 391 aaKnown RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 CDH6P55285 790 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 RPS14P62263 151 aaKnown RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 SNRPD1P62314 119 aaKnown RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 ARHGAP8P85298 464 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 ZNF33AQ06730 810 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 MESDQ14696 234 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 CST6Q15828 149 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 CSRP2Q16527 193 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 SMTNL2Q2TAL5 461 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 KCNT1Q5JUK3 1230 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 C9orf64Q5T6V5 341 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 FAM72AQ5TYM5 149 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 ZNF787Q6DD87 383 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 FAM72DQ6L9T8 149 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 C22orf39Q6P5X5 142 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 TMCO3Q6UWJ1 677 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 XKR5Q6UX68 686 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 LINGO4Q6UY18 593 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 RFX8Q6ZV50 586 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 USP30Q70CQ3 517 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 NLRP14Q86W24 1093 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 FAM72BQ86X60 149 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 GAS2L3Q86XJ1 694 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 KIAA2013Q8IYS2 634 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 STK40Q8N2I9 435 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 BBS5Q8N3I7 341 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 DCLK2Q8N568 766 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 LZTR1Q8N653 840 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 PCDH20Q8N6Y1 951 aaKnown RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 TC2NQ8N9U0 490 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 KCTD6Q8NC69 237 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 CADM4Q8NFZ8 388 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 CEP76Q8TAP6 659 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 RFFLQ8WZ73 363 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 SNX19Q92543 992 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 ANP32BQ92688 251 aaKnown RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 ARHGEF2Q92974 986 aaKnown RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 ARHGEF26Q96DR7 871 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 ALG14Q96F25 216 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 CRELD1Q96HD1 420 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 GPR174Q9BXC1 333 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 TRIM7Q9C029 511 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 PCED1AQ9H1Q7 454 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 PABPC3Q9H361 631 aaKnown RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 SP110Q9HB58 689 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 SEMA4GQ9NTN9 838 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 HAUS2Q9NVX0 235 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 USP36Q9P275 1121 aaKnown RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 TPX2Q9ULW0 747 aaKnown RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 FNDC3AQ9Y2H6 1198 aaKnown RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 OR51B4Q9Y5P0 310 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 CACNA1HO95180 2353 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 A0A1W2PP55 124 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 BCLAF3A2AJT9 711 aaKnown RBP8.49□□□□□ -1.05
PSEN1-209ENST00000553855 FAM47DPA6NHR8 397 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 RASA4BC9J798 803 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 DFFAO00273 331 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 KPNA3O00505 521 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-209ENST00000553855 MCF2LO15068 1137 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 MID1O15344 667 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 RASA4O43374 803 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 KDELR3O43731 214 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 SPOPO43791 374 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 NEBLO76041 1014 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 SEMA4FO95754 770 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 IGSF6O95976 241 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 ZNF806P0C7X5 589 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 RARAP10276 462 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 GOT1P17174 413 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 ERCC2P18074 760 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 CDC25BP30305 580 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 CHRNA3P32297 505 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 MAN1A1P33908 653 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 HOXD12P35452 270 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 ACVRL1P37023 503 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 SLC1A1P43005 524 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 GSDMDP57764 484 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 RHOAP61586 193 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 ZNF252P-AS1Q0IIN9 211 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 PDK2Q15119 407 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 IFI16Q16666 785 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms