RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 SLC2A6Q9UGQ3 507 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 INSL5Q9Y5Q6 135 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 ZFP37Q9Y6Q3 630 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-208ENST00000551338 DOCK6Q96HP0 2047 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 E2F8A0AVK6 867 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 TTC24A2A3L6 582 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-208ENST00000551338 C2orf78A6NCI8 922 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 KIAA0355O15063 1070 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 SNNO75324 88 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-208ENST00000551338 GJB3O75712 270 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 DCTN3O75935 186 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 TIMP1P01033 207 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 MPOP05164 745 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 ATXN1LP0C7T5 689 aaKnown RBP11.65□□□□□ -0.54
RAB5C-208ENST00000551338 ACRP10323 421 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 IRF1P10914 325 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 FGF3P11487 239 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-208ENST00000551338 GABRB3P28472 473 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 ALDH3A1P30838 453 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 ETFBP38117 255 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 ALDH1A3P47895 512 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 GJA8P48165 433 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 SLC11A2P49281 568 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 RPS24P62847 133 aaKnown RBP11.65□□□□□ -0.54
RAB5C-208ENST00000551338 IRX4P78413 519 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 TMPRSS15P98073 1019 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 MPP1Q00013 466 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 IRF9Q00978 393 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 GNA12Q03113 381 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 ITKQ08881 620 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 TWF1Q12792 350 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 SEPT6Q14141 434 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 VEPH1Q14D04 833 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 DLG2Q15700 870 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 FASTKD1Q53R41 847 aaKnown RBP11.65□□□□□ -0.54
RAB5C-208ENST00000551338 ATG16L1Q676U5 607 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 MBLAC2Q68D91 279 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 ALG1LQ6GMV1 187 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 FBXO46Q6PJ61 603 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-208ENST00000551338 CHST9Q7L1S5 443 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 TMEM150AQ86TG1 271 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 DENND1CQ8IV53 801 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 PAWRQ96IZ0 340 aaKnown RBP11.65□□□□□ -0.54
RAB5C-208ENST00000551338 ZNF599Q96NL3 588 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 TRIM55Q9BYV6 548 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 PRKD2Q9BZL6 878 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 NACA2Q9H009 215 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 RNF38Q9H0F5 515 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 MAGEH1Q9H213 219 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 RETREG1Q9H6L5 497 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 ECT2Q9H8V3 914 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 CAB39LQ9H9S4 337 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 GKN1Q9NS71 199 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 ZNF358Q9NW07 568 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 DCDC2Q9UHG0 476 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 ACTL7AQ9Y615 435 aa11.65□□□□□ -0.54
RAB5C-208ENST00000551338 A0A096LPK6 155 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 A0A0D9SEW6 157 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 LOC285095A0A1B0GVY8 99 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 HEATR9A2RTY3 570 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 HGSO14964 777 aaPredicted RBP11.64□□□□□ -0.55
RAB5C-208ENST00000551338 LILRB3O75022 631 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 EFCAB14O75071 495 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 VAPBO95292 243 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 C2P06681 752 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 PAMP19021 973 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 SLC1A2P43004 574 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 HARS2P49590 506 aaKnown RBP11.64□□□□□ -0.55
RAB5C-208ENST00000551338 SERPINH1P50454 418 aaKnown RBP11.64□□□□□ -0.55
RAB5C-208ENST00000551338 ZNF235Q14590 738 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 RABGAP1LQ5R372 815 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 TSTD2Q5T7W7 516 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 ZCCHC23Q6ZST2 131 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 KDELC2Q7Z4H8 507 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 DENND6AQ8IWF6 608 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 TCEAL8Q8IYN2 117 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 C2CD4AQ8NCU7 369 aaPredicted RBP11.64□□□□□ -0.55
RAB5C-208ENST00000551338 ERP27Q96DN0 273 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 ZFRQ96KR1 1074 aaKnown RBP11.64□□□□□ -0.55
RAB5C-208ENST00000551338 SEMA3CQ99985 751 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 MGME1Q9BQP7 344 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 FAM167BQ9BTA0 163 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 TMEM120AQ9BXJ8 343 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 POLR1EQ9GZS1 481 aaKnown RBP11.64□□□□□ -0.55
RAB5C-208ENST00000551338 ZBP1Q9H171 429 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 ZNF395Q9H8N7 513 aaPredicted RBP11.64□□□□□ -0.55
RAB5C-208ENST00000551338 IL21Q9HBE4 155 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 SLC40A1Q9NP59 571 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 UXTQ9UBK9 157 aaPredicted RBP11.64□□□□□ -0.55
RAB5C-208ENST00000551338 DCTN4Q9UJW0 460 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 NUMBLQ9Y6R0 609 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 ATG2AQ2TAZ0 1938 aa11.64□□□□□ -0.55
RAB5C-208ENST00000551338 CARNS1A5YM72 827 aa11.63□□□□□ -0.55
RAB5C-208ENST00000551338 H0YHG0 523 aa11.63□□□□□ -0.55
RAB5C-208ENST00000551338 PRRG1O14668 218 aa11.63□□□□□ -0.55
RAB5C-208ENST00000551338 RASSF9O75901 435 aa11.63□□□□□ -0.55
RAB5C-208ENST00000551338 PAPSS2O95340 614 aaPredicted RBP11.63□□□□□ -0.55
RAB5C-208ENST00000551338 OLFM2O95897 454 aa11.63□□□□□ -0.55
RAB5C-208ENST00000551338 F11P03951 625 aa11.63□□□□□ -0.55
RAB5C-208ENST00000551338 RHOCP08134 193 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms