RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 EBF4Q9BQW3 602 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 TMEM121Q9BTD3 319 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 DCUN1D5Q9BTE7 237 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 C20orf27Q9GZN8 174 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 NAA50Q9GZZ1 169 aaKnown RBP5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ADAMTS10Q9H324 1103 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 FAM96AQ9H5X1 160 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 C7orf69Q9H7B7 122 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ATP13A3Q9H7F0 1226 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 NEK6Q9HC98 313 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ZNF304Q9HCX3 659 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 AASDHPPTQ9NRN7 309 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 PKD2L2Q9NZM6 624 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 HACD3Q9P035 362 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 GMIPQ9P107 970 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 PI4KBQ9UBF8 816 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 HMGXB4Q9UGU5 601 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 BCAP29Q9UHQ4 241 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 DAPK2Q9UIK4 370 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 RAXQ9Y2V3 346 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 ASTN1O14525 1302 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 PLIN4Q96Q06 1357 aa5.38□□□□□ -1.55
LSM3P2-201ENST00000551246 TOGARAM1Q9Y4F4 1720 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 TCRBV3S1A0A5B6 114 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 FAM170AA1A519 330 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 ZSCAN5BA6NJL1 495 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 A6NL46 340 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 A8MU76 341 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 hCG_2039718K7EN88 272 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 FOXN3O00409 490 aaPredicted RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC9A3R1O14745 358 aaPredicted RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 ZW10O43264 779 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 TGFB1I1O43294 461 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 LIASO43766 372 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 CALUO43852 315 aaPredicted RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 LPXNO60711 386 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 ZC3H11AO75152 810 aaKnown RBP eCLIP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 GMNNO75496 209 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 RFPL1O75677 317 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 BCL10O95999 233 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 MT-ND3P03897 115 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 S100BP04271 92 aaPredicted RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 JUNP05412 331 aaKnown RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 FURINP09958 794 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 XRCC1P18887 633 aaPredicted RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 RAB6AP20340 208 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 MATN1P21941 496 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 CSTF2P33240 577 aaKnown RBP eCLIP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 CRHR1P34998 444 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 ETFBP38117 255 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 TECP42680 631 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 FMO5P49326 533 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 HARS2P49590 506 aaKnown RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 EPHB1P54762 984 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC12A3P55017 1021 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 MRPS5P82675 430 aaKnown RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 GHRHRQ02643 423 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 GNA12Q03113 381 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 RAD51Q06609 339 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 BST2Q10589 180 aaKnown RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 KLF10Q13118 480 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 PPIL2Q13356 520 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 NAB1Q13506 487 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 AQP6Q13520 282 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 CEACAM7Q14002 265 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 UBE4AQ14139 1066 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 GALNT3Q14435 633 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 MESDQ14696 234 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 CDK10Q15131 360 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 ZYXQ15942 572 aaKnown RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 LEXMQ3ZCV2 418 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC36A3Q495N2 470 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 AASDHQ4L235 1098 aaPredicted RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 SBK1Q52WX2 424 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 INTS11Q5TA45 600 aaKnown RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 ANGEL2Q5VTE6 544 aaKnown RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 WDR78Q5VTH9 848 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 MBLAC2Q68D91 279 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 HMBOX1Q6NT76 420 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 UGT3A1Q6NUS8 523 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 ERAP2Q6P179 960 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 UNC5AQ6ZN44 842 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 ATG14Q6ZNE5 492 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 BEND4Q6ZU67 534 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 FRMD7Q6ZUT3 714 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 TOM1L2Q6ZVM7 507 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 LIMS2Q7Z4I7 341 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 REC114Q7Z4M0 266 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 KCTD20Q7Z5Y7 419 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 SPRED1Q7Z699 444 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 CRLF3Q8IUI8 442 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 CLEC10AQ8IUN9 316 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 RAVER1Q8IY67 606 aaKnown RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 FAM71AQ8IYT1 594 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 ANKRD13AQ8IZ07 590 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 SIX6OS1Q8N1H7 587 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 MAGEB6Q8N7X4 407 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 NAT8LQ8N9F0 302 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 ASCC1Q8N9N2 400 aaKnown RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 PIK3C3Q8NEB9 887 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms