RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 PCK1P35558 622 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 ETFBP38117 255 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 ABL2P42684 1182 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 CTSKP43235 329 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 RECQLP46063 649 aaPredicted RBP9.94□□□□□ -0.82
HDAC7-229ENST00000549883 GRIA4P48058 902 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 YBEYP58557 167 aaPredicted RBP9.94□□□□□ -0.82
HDAC7-229ENST00000549883 TAS2R40P59535 323 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 RACK1P63244 317 aaKnown RBP9.94□□□□□ -0.82
HDAC7-229ENST00000549883 SFSWAPQ12872 951 aaKnown RBP9.94□□□□□ -0.82
HDAC7-229ENST00000549883 MAPK8IP2Q13387 824 aaPredicted RBP9.94□□□□□ -0.82
HDAC7-229ENST00000549883 FGL2Q14314 439 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 SHBQ15464 509 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 SLC18A3Q16572 532 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 ZNF284Q2VY69 593 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 MYLK3Q32MK0 819 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 FAM182AQ5T1J6 154 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 ERN2Q76MJ5 926 aaKnown RBP9.94□□□□□ -0.82
HDAC7-229ENST00000549883 POLNQ7Z5Q5 900 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 VPS36Q86VN1 386 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 SPATS2Q86XZ4 545 aaKnown RBP9.94□□□□□ -0.82
HDAC7-229ENST00000549883 NIPA2Q8N8Q9 360 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 OR2AP1Q8NGE2 309 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 ZNF564Q8TBZ8 553 aaPredicted RBP9.94□□□□□ -0.82
HDAC7-229ENST00000549883 ISG20Q96AZ6 181 aaKnown RBP9.94□□□□□ -0.82
HDAC7-229ENST00000549883 CCDC114Q96M63 670 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 RETREG1Q9H6L5 497 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 PCDH18Q9HCL0 1135 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.94□□□□□ -0.82
HDAC7-229ENST00000549883 KLHL11Q9NVR0 708 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 HPCAL4Q9UM19 191 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 BTBD3Q9Y2F9 522 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 FARP1Q9Y4F1 1045 aaPredicted RBP9.94□□□□□ -0.82
HDAC7-229ENST00000549883 SPEGQ15772 3267 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 C16orf96A6NNT2 1141 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 DFFAO00273 331 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 MUSKO15146 869 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 VILLO15195 856 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 RAD51BO15315 384 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 SLC7A4O43246 635 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 DAPK3O43293 454 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 PRAMEF11O60813 436 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 PCDH8O95206 1070 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 PIGNO95427 931 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 GSRP00390 522 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 ADRB3P13945 408 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 IL4RP24394 825 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 ITGB7P26010 798 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 GJC1P36383 396 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 ARSEP51690 589 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 NDST2P52849 883 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 CLDN2P57739 230 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 RHOAP61586 193 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 FOXK2Q01167 660 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 SEMG2Q02383 582 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 PIGHQ14442 188 aaPredicted RBP9.93□□□□□ -0.82
HDAC7-229ENST00000549883 DPYSL2Q16555 572 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 PARP15Q460N3 678 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 SARM1Q6SZW1 724 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 TRIM69Q86WT6 500 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 ZSWIM9Q86XI8 627 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 PLPP6Q8IY26 295 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 TSEN2Q8NCE0 465 aaKnown RBP9.93□□□□□ -0.82
HDAC7-229ENST00000549883 LRRN4Q8WUT4 740 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 TSC1Q92574 1164 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 KLHL32Q96NJ5 620 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 CSPG4P5Q96PW8 444 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 HDAC8Q9BY41 377 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 TRIM5Q9C035 493 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 NHEJ1Q9H9Q4 299 aaPredicted RBP9.93□□□□□ -0.82
HDAC7-229ENST00000549883 TM7SF3Q9NS93 570 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 CTTNBP2NLQ9P2B4 639 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 UBA2Q9UBT2 640 aaPredicted RBP9.93□□□□□ -0.82
HDAC7-229ENST00000549883 IP6K2Q9UHH9 426 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 TFR2Q9UP52 801 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 FADS3Q9Y5Q0 445 aa9.93□□□□□ -0.82
HDAC7-229ENST00000549883 PTPRBP23467 1997 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 SSU72P8A0A1W2PR75 194 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 UPK3BL1B0FP48 263 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 UPK3BL2E5RIL1 263 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 MYO1FO00160 1098 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 AKR1B10O60218 316 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 BUB1BO60566 1050 aaPredicted RBP9.92□□□□□ -0.82
HDAC7-229ENST00000549883 CBFA2T3O75081 653 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 POP4O95707 220 aaKnown RBP9.92□□□□□ -0.82
HDAC7-229ENST00000549883 PRKCGP05129 697 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 CEACAM1P13688 526 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 DESP17661 470 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 CD38P28907 300 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 PMLP29590 882 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 HTR7P34969 479 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 SSR1P43307 286 aaKnown RBP9.92□□□□□ -0.82
HDAC7-229ENST00000549883 HCAR3P49019 387 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 NEK3P51956 506 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 GEMIN4P57678 1058 aaKnown RBP9.92□□□□□ -0.82
HDAC7-229ENST00000549883 SNRPD1P62314 119 aaKnown RBP9.92□□□□□ -0.82
HDAC7-229ENST00000549883 TRIM14Q14142 442 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 ACAP1Q15027 740 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 TEAD4Q15561 434 aa9.92□□□□□ -0.82
HDAC7-229ENST00000549883 ZNF423Q2M1K9 1284 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms