RNA–Protein interactions for RNA: ENST00000547148.5

PFKM-208, Transcript of phosphofructokinase, muscle, human

TSL 3

Gene PFKM, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-208	ENST00000547148	MRPS21	P82921	87 aa	Known RBP	12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	SIGLEC14	Q08ET2	396 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	NSUN2	Q08J23	767 aa	Known RBP eCLIP	12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	NIPAL4	Q0D2K0	466 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	IHH	Q14623	411 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	PPP1R7	Q15435	360 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	TRIP13	Q15645	432 aa	Predicted RBP	12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	ACCSL	Q4AC99	568 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	C2orf27A	Q580R0	203 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	ITPRIPL1	Q6GPH6	555 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	SERPINA13P	Q6UXR4	307 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148		Q6ZS52	159 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	ARHGEF18	Q6ZSZ5	1173 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	SYDE1	Q6ZW31	735 aa	Predicted RBP	12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	CHPF	Q8IZ52	775 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	OR2AP1	Q8NGE2	309 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	OR2A12	Q8NGT7	310 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	EDA	Q92838	391 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	IMP4	Q96G21	291 aa	Known RBP	12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	NSMCE3	Q96MG7	304 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	GDAP1L1	Q96MZ0	367 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	TRIM51	Q9BSJ1	452 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	TM6SF2	Q9BZW4	377 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	GLOD4	Q9HC38	313 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	PAK5	Q9P286	719 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	TTLL3	Q9Y4R7	772 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	USP34	Q70CQ2	3546 aa		12.09	□□□□□ -0.47
PFKM-208	ENST00000547148	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	EDDM13	A0A1B0GTR0	161 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	WASH3P	C4AMC7	463 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148		F5H423	210 aa	Predicted RBP	12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	RIOK3	O14730	519 aa	Known RBP	12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	INSIG1	O15503	277 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	SLU7	O95391	586 aa	Known RBP	12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	IGSF6	O95976	241 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	MMP2	P08253	660 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	PSMB4	P28070	264 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	NTSR1	P30989	418 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	CSNK1D	P48730	415 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	VPS41	P49754	854 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	SNRPD1	P62314	119 aa	Known RBP	12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	DSC2	Q02487	901 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	LRRC32	Q14392	662 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	UBXN2B	Q14CS0	331 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	E2F5	Q15329	346 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	HSF5	Q4G112	596 aa	Predicted RBP	12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	CARD16	Q5EG05	197 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	C9orf64	Q5T6V5	341 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	C8orf74	Q6P047	294 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	PKN3	Q6P5Z2	889 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	DPY19L3	Q6ZPD9	716 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	PID1	Q7Z2X4	250 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	TRMT11	Q7Z4G4	463 aa	Known RBP	12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	MAATS1	Q7Z4T9	603 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	PRPF39	Q86UA1	669 aa	Known RBP	12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	KLHDC8B	Q8IXV7	354 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	PLPP6	Q8IY26	295 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	SYNPO	Q8N3V7	929 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	PJA1	Q8NG27	643 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	OR6K2	Q8NGY2	324 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	CCDC26	Q8TAB7	109 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	PTPRN2	Q92932	1015 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	TADA1	Q96BN2	335 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	OXNAD1	Q96HP4	312 aa	Predicted RBP	12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	FCRL5	Q96RD9	977 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	NUDCD1	Q96RS6	583 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	NELL2	Q99435	816 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	SEMA3C	Q99985	751 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	LRRC1	Q9BTT6	524 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	MLPH	Q9BV36	600 aa	Predicted RBP	12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	OSBPL6	Q9BZF3	934 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	IRF2BPL	Q9H1B7	796 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	SLC25A51	Q9H1U9	297 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	NOD2	Q9HC29	1040 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	HECA	Q9UBI9	543 aa	Predicted RBP	12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	RSPH14	Q9UHP6	348 aa		12.08	□□□□□ -0.48
PFKM-208	ENST00000547148	FAM187A	A6NFU0	413 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	FAM170B	A6NMN3	283 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	SIN3B	O75182	1162 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	NEBL	O76041	1014 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	KLF8	O95600	359 aa	Predicted RBP	12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	IVD	P26440	423 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	WAS	P42768	502 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	MAPK8	P45983	427 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	CCNH	P51946	323 aa	Predicted RBP	12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	AP1S1	P61966	158 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	SKOR1	P84550	965 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	ITK	Q08881	620 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	GPS1	Q13098	491 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	SEMA5A	Q13591	1074 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	GAS6	Q14393	721 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	PARP6	Q2NL67	630 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	RALGPS1	Q5JS13	557 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	FAXC	Q5TGI0	409 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	CWF19L1	Q69YN2	538 aa	Known RBP	12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	NCEH1	Q6PIU2	408 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	C4orf22	Q6V702	233 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	SRL	Q86TD4	932 aa		12.07	□□□□□ -0.48
PFKM-208	ENST00000547148	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	12.07	□□□□□ -0.48

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